BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024281
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46338.1| unknown [Lotus japonicus]                               67   2e-09
gb|AFK39000.1| unknown [Lotus japonicus]                               67   2e-09
pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 5...    66   3e-09
ref|NP_197518.1| Ribosomal protein L36 [Arabidopsis thaliana] gi...    66   3e-09
ref|XP_002871926.1| ribosomal protein L36 family protein [Arabid...    65   4e-09

>gb|AFK46338.1| unknown [Lotus japonicus]
          Length = 99

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 109 MKVRSSVKKMCEFCKTVKRRGRVYVLCSANP 201
           MKVRSSVKKMCEFCKTVKRRGRVYV+CSANP
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSANP 31


>gb|AFK39000.1| unknown [Lotus japonicus]
          Length = 99

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 109 MKVRSSVKKMCEFCKTVKRRGRVYVLCSANP 201
           MKVRSSVKKMCEFCKTVKRRGRVYV+CSANP
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSANP 31


>pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
          Length = 104

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = +1

Query: 109 MKVRSSVKKMCEFCKTVKRRGRVYVLCSANP 201
           MKVRSSVKKMCEFCKTVKRRGRVYV+CS+NP
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNP 31


>ref|NP_197518.1| Ribosomal protein L36 [Arabidopsis thaliana]
           gi|30687686|ref|NP_850857.1| Ribosomal protein L36
           [Arabidopsis thaliana] gi|17065488|gb|AAL32898.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20148663|gb|AAM10222.1| unknown protein [Arabidopsis
           thaliana] gi|21555484|gb|AAM63869.1| ribosomal protein
           L36-like [Arabidopsis thaliana]
           gi|222424094|dbj|BAH20007.1| AT5G20180 [Arabidopsis
           thaliana] gi|332005426|gb|AED92809.1| Ribosomal protein
           L36 [Arabidopsis thaliana] gi|332005427|gb|AED92810.1|
           Ribosomal protein L36 [Arabidopsis thaliana]
          Length = 103

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = +1

Query: 109 MKVRSSVKKMCEFCKTVKRRGRVYVLCSANP 201
           MKVRSSVKKMCEFCKTVKRRGRVYV+CS+NP
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNP 31


>ref|XP_002871926.1| ribosomal protein L36 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317763|gb|EFH48185.1| ribosomal protein
           L36 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = +1

Query: 109 MKVRSSVKKMCEFCKTVKRRGRVYVLCSANP 201
           MKVRSSVKKMCEFCKTVKRRGRVY++CS+NP
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYIICSSNP 31