BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024269
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]   180   1e-43
emb|CBI25024.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Ja...   162   3e-38
ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38

>emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
          Length = 641

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/144 (61%), Positives = 106/144 (73%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           LDVYAKC L+  A  +F+ M ERS VTWSSM++GYVQN  +EEAL+LFH+ Q +G E  Q
Sbjct: 190 LDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQ 249

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             LIEG Q+ A+L +TG G N+FV +SLIDMYAKCGIIE+AY+VFS 
Sbjct: 250 FTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSS 309

Query: 72  VEAKNIVLWNAMMSGFSRHAHSLE 1
           VE KN+VLWNAM+SGFSRH  SLE
Sbjct: 310 VEEKNVVLWNAMLSGFSRHVRSLE 333



 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/136 (35%), Positives = 84/136 (61%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           +++Y+KC L+  A ++FD M  RS V+W++M+  + QN   E+AL+LF + QK G   ++
Sbjct: 89  MNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSE 148

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             + E  Q+H   ++T    N+FV  +L+D+YAKCG+++DA LVF  
Sbjct: 149 FTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFEC 208

Query: 72  VEAKNIVLWNAMMSGF 25
           +  ++ V W++M++G+
Sbjct: 209 MPERSDVTWSSMVAGY 224



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/136 (22%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           +D+YAKC +I  A  +F S+ E++ V W++M+SG+ ++    EA++ F K Q++G    +
Sbjct: 291 IDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNE 350

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRT-GYGLNLFVSASLIDMYAKCGIIEDAY-LVF 79
            T             + +G +   +++R      N+   + ++D+  + G++ +A  L+ 
Sbjct: 351 ITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLID 410

Query: 78  SMVEAKNIVLWNAMMS 31
            M       +W ++++
Sbjct: 411 RMPFDATASMWGSLLA 426


>emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  174 bits (441), Expect = 7e-42
 Identities = 86/144 (59%), Positives = 104/144 (72%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           LDVYAKC L+  A  +F+ M ERS VTWSSM++GYVQN  +EEAL+LFH+ Q +G E  Q
Sbjct: 190 LDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQ 249

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             LIEG Q+ A+  +TG G N+FV +SLIDMYAKCGIIE+AY VFS 
Sbjct: 250 FTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSS 309

Query: 72  VEAKNIVLWNAMMSGFSRHAHSLE 1
           VE KN+VLWNA++SGFSRH  SLE
Sbjct: 310 VEEKNVVLWNAILSGFSRHVRSLE 333



 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/136 (35%), Positives = 84/136 (61%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           +++Y+KC L+  A ++FD M  RS V+W++M+  + QN   E+AL+LF + QK G   ++
Sbjct: 89  MNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSE 148

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             + E  Q+H   ++T    N+FV  +L+D+YAKCG+++DA LVF  
Sbjct: 149 FTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFEC 208

Query: 72  VEAKNIVLWNAMMSGF 25
           +  ++ V W++M++G+
Sbjct: 209 MPERSDVTWSSMVAGY 224


>ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  174 bits (441), Expect = 7e-42
 Identities = 86/144 (59%), Positives = 104/144 (72%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           LDVYAKC L+  A  +F+ M ERS VTWSSM++GYVQN  +EEAL+LFH+ Q +G E  Q
Sbjct: 163 LDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQ 222

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             LIEG Q+ A+  +TG G N+FV +SLIDMYAKCGIIE+AY VFS 
Sbjct: 223 FTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSS 282

Query: 72  VEAKNIVLWNAMMSGFSRHAHSLE 1
           VE KN+VLWNA++SGFSRH  SLE
Sbjct: 283 VEEKNVVLWNAILSGFSRHVRSLE 306



 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/136 (35%), Positives = 84/136 (61%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           +++Y+KC L+  A ++FD M  RS V+W++M+  + QN   E+AL+LF + QK G   ++
Sbjct: 62  MNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSE 121

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             + E  Q+H   ++T    N+FV  +L+D+YAKCG+++DA LVF  
Sbjct: 122 FTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFEC 181

Query: 72  VEAKNIVLWNAMMSGF 25
           +  ++ V W++M++G+
Sbjct: 182 MPERSDVTWSSMVAGY 197


>gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
           gi|125535837|gb|EAY82325.1| hypothetical protein
           OsI_37535 [Oryza sativa Indica Group]
           gi|125578563|gb|EAZ19709.1| hypothetical protein
           OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/144 (52%), Positives = 103/144 (71%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           LDVYAKC +I  AC +F++M E+++VTWSS+ +G+VQN  HEE L LF   Q+ G + T+
Sbjct: 199 LDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTE 258

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             +IEG Q+HA++V+ G+  NLFV+ SL+D+YAKCG IE +Y VF+ 
Sbjct: 259 FTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFAD 318

Query: 72  VEAKNIVLWNAMMSGFSRHAHSLE 1
           +E KN+VLWNAM++ FSRHAHS E
Sbjct: 319 MEEKNVVLWNAMIASFSRHAHSWE 342



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/136 (34%), Positives = 78/136 (57%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           +++Y KC   + A R+FD+M+ RS ++W++MI+GY  N    EAL LF +  + G + T+
Sbjct: 98  INLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTE 157

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             +IE  Q+H I ++     + FV  + +D+YAKC +I+DA  VF  
Sbjct: 158 FTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFEN 217

Query: 72  VEAKNIVLWNAMMSGF 25
           +  K  V W+++ +GF
Sbjct: 218 MPEKTSVTWSSLFAGF 233


>ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/144 (52%), Positives = 101/144 (70%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           LDVYAKC +I  AC +F+ M ER+ VTWSS+ +GYVQN  HEEAL LF   Q+ G E T+
Sbjct: 200 LDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTE 259

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT              IEG Q+HA++++ G+  N FV+ASL+D+YA+CG IE AY +F+ 
Sbjct: 260 FTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAY 319

Query: 72  VEAKNIVLWNAMMSGFSRHAHSLE 1
           +E KN+V+WNAM++ FSRHAHS E
Sbjct: 320 MEHKNVVIWNAMIASFSRHAHSWE 343



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/136 (30%), Positives = 75/136 (55%)
 Frame = -1

Query: 432 LDVYAKCELINYACRIFDSMTERSAVTWSSMISGYVQNNFHEEALMLFHKGQKVGAEQTQ 253
           +++Y KC   + A  +FD M  RS V+W++MI+GY  +    +AL LF +  + G   ++
Sbjct: 99  INLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSE 158

Query: 252 FTXXXXXXXXXXXXXLIEGNQIHAILVRTGYGLNLFVSASLIDMYAKCGIIEDAYLVFSM 73
           FT             + E  Q+H I ++     N FV  +++D+YAKC +I+DA  VF  
Sbjct: 159 FTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEK 218

Query: 72  VEAKNIVLWNAMMSGF 25
           +  + +V W+++ +G+
Sbjct: 219 MPERTLVTWSSLFAGY 234