BLASTX nr result

ID: Coptis25_contig00024267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024267
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276201.1| PREDICTED: uncharacterized protein LOC100259...    63   3e-08
gb|AFW73210.1| hypothetical protein ZEAMMB73_953909 [Zea mays]         55   8e-06
ref|XP_002523000.1| conserved hypothetical protein [Ricinus comm...    55   8e-06
ref|NP_001140331.1| uncharacterized protein LOC100272378 [Zea ma...    55   8e-06

>ref|XP_002276201.1| PREDICTED: uncharacterized protein LOC100259501 [Vitis vinifera]
           gi|297734203|emb|CBI15450.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/88 (46%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
 Frame = -3

Query: 240 YFQYXXXXXXXXXXXXLAGLEEILNY-FQAMKNKSPI-------SSKKRKVDIDKHYLQS 85
           YFQY             A LEE+L+  FQ +  K P        S KKRK D  K+    
Sbjct: 42  YFQYLLKVRRDLKLLQSANLEELLSSCFQVIHGKKPQQKVHLLESLKKRKGDGGKYNFME 101

Query: 84  RLLGVARLLSQMVEPMIKAAIVLASLLA 1
           RLLG ARLLS+MVEPM+KAAI +++LLA
Sbjct: 102 RLLGAARLLSEMVEPMLKAAIEISTLLA 129


>gb|AFW73210.1| hypothetical protein ZEAMMB73_953909 [Zea mays]
          Length = 245

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
 Frame = -3

Query: 246 AFYFQYXXXXXXXXXXXXLAGLEEILN-YFQAMKNKSPISS------KKRKVDIDKHYLQ 88
           A YFQY             AGL E+LN  F  +  + P ++      + +K  +  H   
Sbjct: 47  AAYFQYLLKVRRDLKLLLGAGLAEVLNAVFPVLACRKPANTILVPNKQSKKKPVANHSHH 106

Query: 87  SRLLGVARLLSQMVEPMIKAAIVLASLLA 1
            RLLGVARLLSQM EP++KAAI +  LLA
Sbjct: 107 QRLLGVARLLSQMSEPVMKAAIQITFLLA 135


>ref|XP_002523000.1| conserved hypothetical protein [Ricinus communis]
           gi|223537812|gb|EEF39430.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/88 (44%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
 Frame = -3

Query: 240 YFQYXXXXXXXXXXXXLAGLEEIL-NYFQAMKNKSPI-------SSKKRKVDIDKHYLQS 85
           YFQY             A LEE+L + F  +  K P        S K RK D        
Sbjct: 42  YFQYLLKVRRDLRLLQSAKLEELLGSCFHVITGKKPKQKVHLLESLKWRKCDHGVPNFME 101

Query: 84  RLLGVARLLSQMVEPMIKAAIVLASLLA 1
           RLLG ARLLSQMVEPM+KAAI +++LLA
Sbjct: 102 RLLGAARLLSQMVEPMLKAAIEVSTLLA 129


>ref|NP_001140331.1| uncharacterized protein LOC100272378 [Zea mays]
           gi|194699028|gb|ACF83598.1| unknown [Zea mays]
          Length = 247

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
 Frame = -3

Query: 246 AFYFQYXXXXXXXXXXXXLAGLEEILN-YFQAMKNKSPISS------KKRKVDIDKHYLQ 88
           A YFQY             AGL E+LN  F  +  + P ++      + +K  +  H   
Sbjct: 47  AAYFQYLLKVRRDLKLLLGAGLAEVLNAVFPVLACRKPANTILVPNKQSKKKPVANHSHH 106

Query: 87  SRLLGVARLLSQMVEPMIKAAIVLASLLA 1
            RLLGVARLLSQM EP++KAAI +  LLA
Sbjct: 107 QRLLGVARLLSQMSEPVMKAAIQITFLLA 135


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