BLASTX nr result

ID: Coptis25_contig00024253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024253
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271358.1| PREDICTED: aspartyl-tRNA synthetase [Vitis v...   408   e-112
ref|XP_002522090.1| aspartyl-tRNA synthetase, putative [Ricinus ...   400   e-109
ref|XP_004156904.1| PREDICTED: aspartate--tRNA ligase-like [Cucu...   393   e-107
ref|XP_004150278.1| PREDICTED: aspartate--tRNA ligase-like [Cucu...   393   e-107
ref|XP_002298795.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106

>ref|XP_002271358.1| PREDICTED: aspartyl-tRNA synthetase [Vitis vinifera]
           gi|297736395|emb|CBI25118.3| unnamed protein product
           [Vitis vinifera]
          Length = 657

 Score =  408 bits (1049), Expect = e-112
 Identities = 200/266 (75%), Positives = 221/266 (83%)
 Frame = +2

Query: 20  TETHIPDTKSVVPLRDSLQWVSRTNLCENLSVNDVGKRVRLCGWVALHRIHGGVTFVNIR 199
           TET I D K  + L+D+LQWVSRT  C  LSV+DVGKRVR+CGWVALHR+HGG+TF+N+R
Sbjct: 46  TETQISDPKPSIILKDTLQWVSRTGFCGELSVDDVGKRVRICGWVALHRVHGGLTFLNLR 105

Query: 200 DHTGIVQITTLPDEFPDAHSAVNELRLEYVVCIEGVVRSRPVESLNKKMKTGSIEIAAEN 379
           DHTGIVQ+TTLPDEFP AHS VNELRLEYV+ +EG+VRSRP ES+NKKM+TG IE+A E+
Sbjct: 106 DHTGIVQVTTLPDEFPKAHSTVNELRLEYVIAVEGIVRSRPSESINKKMRTGLIEVAVEH 165

Query: 380 VLVLNSVRSKLPFLVXXXXXXXXXXXXXXXXXXXXXXXXXQQMNSNLMLRHRVLKLIRRY 559
           V VLN+V SKLPFLV                         QQMNSN+MLRHRV+KLIRRY
Sbjct: 166 VQVLNAVTSKLPFLVTTADDAKDTVKEEIRLRYRCLDLRRQQMNSNIMLRHRVVKLIRRY 225

Query: 560 LEDVHAFVEIETPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYY 739
           LED+H FVEIETPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYY
Sbjct: 226 LEDIHGFVEIETPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYY 285

Query: 740 QIARCFRDEDLRVDRQPEFTQLDMEL 817
           QIARCFRDEDLR DRQPEFTQLDMEL
Sbjct: 286 QIARCFRDEDLRADRQPEFTQLDMEL 311


>ref|XP_002522090.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
           gi|223538689|gb|EEF40290.1| aspartyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 668

 Score =  400 bits (1028), Expect = e-109
 Identities = 195/255 (76%), Positives = 215/255 (84%)
 Frame = +2

Query: 53  VPLRDSLQWVSRTNLCENLSVNDVGKRVRLCGWVALHRIHGGVTFVNIRDHTGIVQITTL 232
           VP +++L WVSRT LC  LSVNDVGKRV LCGWVALHR+HGG+TF+N+RDHTG VQ+TTL
Sbjct: 69  VPFKETLNWVSRTGLCGELSVNDVGKRVLLCGWVALHRVHGGLTFLNLRDHTGTVQVTTL 128

Query: 233 PDEFPDAHSAVNELRLEYVVCIEGVVRSRPVESLNKKMKTGSIEIAAENVLVLNSVRSKL 412
           PDEFPDAHS +N+LRLEYVV +EGVVRSRP ES+NKKMKTG +E+AAENV +LN+VR+KL
Sbjct: 129 PDEFPDAHSIINDLRLEYVVAVEGVVRSRPTESVNKKMKTGLVEVAAENVQILNAVRTKL 188

Query: 413 PFLVXXXXXXXXXXXXXXXXXXXXXXXXXQQMNSNLMLRHRVLKLIRRYLEDVHAFVEIE 592
           PFLV                         QQMN N+MLRHRV+KLIRRYLEDV+ FVEIE
Sbjct: 189 PFLVTTADDAKDSVKEEIRLRFRCLDLRRQQMNFNMMLRHRVVKLIRRYLEDVYGFVEIE 248

Query: 593 TPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDL 772
           TPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDL
Sbjct: 249 TPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDL 308

Query: 773 RVDRQPEFTQLDMEL 817
           R DRQPEFTQLDMEL
Sbjct: 309 RADRQPEFTQLDMEL 323


>ref|XP_004156904.1| PREDICTED: aspartate--tRNA ligase-like [Cucumis sativus]
          Length = 670

 Score =  393 bits (1010), Expect = e-107
 Identities = 192/266 (72%), Positives = 219/266 (82%)
 Frame = +2

Query: 20  TETHIPDTKSVVPLRDSLQWVSRTNLCENLSVNDVGKRVRLCGWVALHRIHGGVTFVNIR 199
           TE  +P +    P +DSLQW++RT LC  LSV+DVGKRVRLCGWVALHR+HGG+TF+N+R
Sbjct: 59  TEILVPTSNPHSPFKDSLQWINRTALCGELSVDDVGKRVRLCGWVALHRVHGGLTFLNLR 118

Query: 200 DHTGIVQITTLPDEFPDAHSAVNELRLEYVVCIEGVVRSRPVESLNKKMKTGSIEIAAEN 379
           DH+GIVQ+TTLP+EFPDAHS +N+LRLEYVV +EG VRSRP +S+N KMKTG IE+AAE+
Sbjct: 119 DHSGIVQVTTLPNEFPDAHSTINDLRLEYVVAVEGTVRSRPGDSVNVKMKTGLIEVAAEH 178

Query: 380 VLVLNSVRSKLPFLVXXXXXXXXXXXXXXXXXXXXXXXXXQQMNSNLMLRHRVLKLIRRY 559
           V +LNSV SKLPFLV                         +QMN N+MLRH+V+KL+RRY
Sbjct: 179 VQILNSVGSKLPFLVTTADDAKDSAKEEIRLRYRYLDLRRKQMNFNIMLRHKVVKLLRRY 238

Query: 560 LEDVHAFVEIETPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYY 739
           LEDVH FVEIETPILSRSTPEGARDYLVPSRVQPGTF+ALPQSPQLFKQMLMVSGFDKYY
Sbjct: 239 LEDVHGFVEIETPILSRSTPEGARDYLVPSRVQPGTFFALPQSPQLFKQMLMVSGFDKYY 298

Query: 740 QIARCFRDEDLRVDRQPEFTQLDMEL 817
           QIARCFRDEDLR DRQPEFTQLDMEL
Sbjct: 299 QIARCFRDEDLRADRQPEFTQLDMEL 324


>ref|XP_004150278.1| PREDICTED: aspartate--tRNA ligase-like [Cucumis sativus]
          Length = 666

 Score =  393 bits (1010), Expect = e-107
 Identities = 192/266 (72%), Positives = 219/266 (82%)
 Frame = +2

Query: 20  TETHIPDTKSVVPLRDSLQWVSRTNLCENLSVNDVGKRVRLCGWVALHRIHGGVTFVNIR 199
           TE  +P +    P +DSLQW++RT LC  LSV+DVGKRVRLCGWVALHR+HGG+TF+N+R
Sbjct: 59  TEILVPTSNPHSPFKDSLQWINRTALCGELSVDDVGKRVRLCGWVALHRVHGGLTFLNLR 118

Query: 200 DHTGIVQITTLPDEFPDAHSAVNELRLEYVVCIEGVVRSRPVESLNKKMKTGSIEIAAEN 379
           DH+GIVQ+TTLP+EFPDAHS +N+LRLEYVV +EG VRSRP +S+N KMKTG IE+AAE+
Sbjct: 119 DHSGIVQVTTLPNEFPDAHSTINDLRLEYVVAVEGTVRSRPGDSVNVKMKTGLIEVAAEH 178

Query: 380 VLVLNSVRSKLPFLVXXXXXXXXXXXXXXXXXXXXXXXXXQQMNSNLMLRHRVLKLIRRY 559
           V +LNSV SKLPFLV                         +QMN N+MLRH+V+KL+RRY
Sbjct: 179 VQILNSVGSKLPFLVTTADDAKDSAKEEIRLRYRYLDLRRKQMNFNIMLRHKVVKLLRRY 238

Query: 560 LEDVHAFVEIETPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYY 739
           LEDVH FVEIETPILSRSTPEGARDYLVPSRVQPGTF+ALPQSPQLFKQMLMVSGFDKYY
Sbjct: 239 LEDVHGFVEIETPILSRSTPEGARDYLVPSRVQPGTFFALPQSPQLFKQMLMVSGFDKYY 298

Query: 740 QIARCFRDEDLRVDRQPEFTQLDMEL 817
           QIARCFRDEDLR DRQPEFTQLDMEL
Sbjct: 299 QIARCFRDEDLRADRQPEFTQLDMEL 324


>ref|XP_002298795.1| predicted protein [Populus trichocarpa] gi|222846053|gb|EEE83600.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  389 bits (1000), Expect = e-106
 Identities = 189/252 (75%), Positives = 211/252 (83%)
 Frame = +2

Query: 62  RDSLQWVSRTNLCENLSVNDVGKRVRLCGWVALHRIHGGVTFVNIRDHTGIVQITTLPDE 241
           +D+L WVSRTN C  LS+NDVG RVRLCGWVALHR+HGG+TF N+RDHTGIVQ+ TLPDE
Sbjct: 70  KDTLLWVSRTNFCGQLSINDVGARVRLCGWVALHRVHGGLTFFNLRDHTGIVQVATLPDE 129

Query: 242 FPDAHSAVNELRLEYVVCIEGVVRSRPVESLNKKMKTGSIEIAAENVLVLNSVRSKLPFL 421
           FPDAHS +N+LR+EYVV +EGVVRSRPVES+NKKM TGSIE+ AE+  +LN+V++KLPFL
Sbjct: 130 FPDAHSIINDLRVEYVVVVEGVVRSRPVESVNKKMATGSIEVVAEHAQLLNAVKAKLPFL 189

Query: 422 VXXXXXXXXXXXXXXXXXXXXXXXXXQQMNSNLMLRHRVLKLIRRYLEDVHAFVEIETPI 601
           V                         QQM+SN+MLRHRV+KLIRRYLEDV  FVEIETPI
Sbjct: 190 VTTVDDAKDSVKEEIRLRYRCLDLRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPI 249

Query: 602 LSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRVD 781
           LSRSTPEGARDYLVPSR+QPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLR D
Sbjct: 250 LSRSTPEGARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRAD 309

Query: 782 RQPEFTQLDMEL 817
           RQPEFTQLDMEL
Sbjct: 310 RQPEFTQLDMEL 321


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