BLASTX nr result

ID: Coptis25_contig00024246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024246
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530655.1| conserved hypothetical protein [Ricinus comm...   171   6e-41
ref|XP_002303358.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_003525572.1| PREDICTED: uncharacterized protein LOC100819...   161   7e-38
ref|XP_002326459.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_003611333.1| hypothetical protein MTR_5g012870 [Medicago ...   158   4e-37

>ref|XP_002530655.1| conserved hypothetical protein [Ricinus communis]
           gi|223529788|gb|EEF31724.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score =  171 bits (433), Expect = 6e-41
 Identities = 88/169 (52%), Positives = 113/169 (66%), Gaps = 6/169 (3%)
 Frame = +1

Query: 1   LKARLPKEARNNATIIPYERGLTEIC------HSELEIMDSPCKGELLLRTQTGVLRWKR 162
           L+ARLPKEA+ NA I P +RG+ +          E+E    PC GEL+  T+ GVLRWK 
Sbjct: 220 LRARLPKEAKKNAAISPCDRGMADTSWDSAYSSGEVEAQAPPCNGELMQHTRKGVLRWKL 279

Query: 163 VSVYINKSFQVIVKLKSKHVGGAFSKKKKCVVYGICEGISTWTTSDTKNSLEESSHFGLR 342
           +SVYINK  +VI+K+KSKHVGGAFSKK KC+VYG+C+  + W     + S  E  +FGL+
Sbjct: 280 ISVYINKKSEVIIKIKSKHVGGAFSKKHKCIVYGVCDETTAWPYRKERES-SEDVYFGLK 338

Query: 343 TAQGVLEFKSKNKDQRQRWVDNVRYLLHKAGGVDGMESSLELLKINRDI 489
           TAQG+LEFK KNK  +QRWVD ++ LL +   V+  E SLE L IN  I
Sbjct: 339 TAQGLLEFKCKNKIHKQRWVDGIQNLL-QVSCVEATEGSLEFLSINDSI 386


>ref|XP_002303358.1| predicted protein [Populus trichocarpa] gi|222840790|gb|EEE78337.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  169 bits (429), Expect = 2e-40
 Identities = 84/165 (50%), Positives = 111/165 (67%), Gaps = 5/165 (3%)
 Frame = +1

Query: 1   LKARLPKEARNNATIIPYERGL-----TEICHSELEIMDSPCKGELLLRTQTGVLRWKRV 165
           LK+RLPKEAR NA I PY+RG+     T   +  +E    PC GELL  T+ GV+RWK V
Sbjct: 207 LKSRLPKEARRNAAISPYDRGVADTHWTSSSNGPIEEQGPPCVGELLQHTKKGVMRWKHV 266

Query: 166 SVYINKSFQVIVKLKSKHVGGAFSKKKKCVVYGICEGISTWTTSDTKNSLEESSHFGLRT 345
           +VYINK  QV++K+KSKHVGGA SKK+K VVYG+C+  + W     + +  E  +FG++T
Sbjct: 267 TVYINKKSQVLIKIKSKHVGGALSKKQKGVVYGVCDETTAWPYRKERETGTEEVYFGIKT 326

Query: 346 AQGVLEFKSKNKDQRQRWVDNVRYLLHKAGGVDGMESSLELLKIN 480
           AQG+LEFK KNK  +QRWVD ++ LL +   V+  + SL  L IN
Sbjct: 327 AQGLLEFKCKNKIHKQRWVDGIQSLLRQVSSVEETDHSLTCLSIN 371


>ref|XP_003525572.1| PREDICTED: uncharacterized protein LOC100819149 [Glycine max]
          Length = 394

 Score =  161 bits (407), Expect = 7e-38
 Identities = 85/168 (50%), Positives = 107/168 (63%), Gaps = 6/168 (3%)
 Frame = +1

Query: 1   LKARLPKEARNNATIIPYERGLTEICHSELEIMDS------PCKGELLLRTQTGVLRWKR 162
           L+ARLP EA+ NA+I PY+R L    H              PC G+L   T+ GVLRWK 
Sbjct: 227 LRARLPNEAKRNASISPYDRVLLPQSHRFFAFEGQSCEHHPPCVGDLSQLTRKGVLRWKH 286

Query: 163 VSVYINKSFQVIVKLKSKHVGGAFSKKKKCVVYGICEGISTWTTSDTKNSLEESSHFGLR 342
           VSVYINK  QV +K+KSKHVGGAFSKK KCVVYGIC+    W     + + EE  +FGL+
Sbjct: 287 VSVYINKKCQVKIKIKSKHVGGAFSKKNKCVVYGICDKDGAWPYRKERKTSEE-FYFGLK 345

Query: 343 TAQGVLEFKSKNKDQRQRWVDNVRYLLHKAGGVDGMESSLELLKINRD 486
           TAQG+LEFK  +K  +Q+WVD +  LL +   ++  E SL+LL IN D
Sbjct: 346 TAQGLLEFKCDSKLHKQKWVDGIGCLLRRVNSIEATERSLDLLSINSD 393


>ref|XP_002326459.1| predicted protein [Populus trichocarpa] gi|222833781|gb|EEE72258.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  160 bits (405), Expect = 1e-37
 Identities = 84/165 (50%), Positives = 110/165 (66%), Gaps = 5/165 (3%)
 Frame = +1

Query: 1   LKARLPKEARNNATIIPYERGLTEI-----CHSELEIMDSPCKGELLLRTQTGVLRWKRV 165
           LKARLPKEAR NA I PY+RG+         +  LE    PC GELL  T+ G LRWK V
Sbjct: 219 LKARLPKEARRNAAISPYDRGVANTPYWTSLNGPLEERGPPCVGELLQHTKKGALRWKHV 278

Query: 166 SVYINKSFQVIVKLKSKHVGGAFSKKKKCVVYGICEGISTWTTSDTKNSLEESSHFGLRT 345
           +VYINK  QV++K+KSKHVGGA SKK K VVYG+C+  + W     + S EE  +FG++T
Sbjct: 279 TVYINKKSQVLIKIKSKHVGGALSKKHKGVVYGVCDETTAWRYIKERVSTEE-VYFGIKT 337

Query: 346 AQGVLEFKSKNKDQRQRWVDNVRYLLHKAGGVDGMESSLELLKIN 480
           AQG+ EF+ K+K  +QRWVD+++ LL +   V+  + SL+ L IN
Sbjct: 338 AQGLHEFECKSKVHKQRWVDDIKNLLQQVSYVEVTDRSLKCLSIN 382


>ref|XP_003611333.1| hypothetical protein MTR_5g012870 [Medicago truncatula]
           gi|355512668|gb|AES94291.1| hypothetical protein
           MTR_5g012870 [Medicago truncatula]
          Length = 389

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/158 (50%), Positives = 109/158 (68%), Gaps = 6/158 (3%)
 Frame = +1

Query: 1   LKARLPKEARNNATIIPYERGLTEI-CH--SELEIMD---SPCKGELLLRTQTGVLRWKR 162
           L+AR PKEA+ NA+I PY+RG+ E  C   SE ++ D   SPC+G+LL  T+ G LRWK 
Sbjct: 232 LRARFPKEAKKNASISPYDRGIAETHCSPASECQMFDENHSPCEGDLLQVTEKGALRWKH 291

Query: 163 VSVYINKSFQVIVKLKSKHVGGAFSKKKKCVVYGICEGISTWTTSDTKNSLEESSHFGLR 342
           V+VYIN  +QV +K+KSKH+GGAFSKK KCVVYG+C   S W     + +  E  +FGL+
Sbjct: 292 VAVYINMKYQVKIKIKSKHIGGAFSKKHKCVVYGVCNEDSAWPYRKEREA-SEDLYFGLK 350

Query: 343 TAQGVLEFKSKNKDQRQRWVDNVRYLLHKAGGVDGMES 456
           TAQG+LEFK ++K  +Q+WVD + +LL +    +  E+
Sbjct: 351 TAQGLLEFKCESKLHKQKWVDGIEFLLGRVNSAETTEN 388


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