BLASTX nr result

ID: Coptis25_contig00024245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024245
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241309.1| uncharacterized protein LOC100801987 [Glycin...    98   2e-18
ref|NP_001239873.1| uncharacterized protein LOC100794670 [Glycin...    96   7e-18
ref|XP_002277190.1| PREDICTED: vesicle-associated protein 2-2 [V...    94   3e-17
ref|XP_002516861.1| vesicle-associated membrane protein, putativ...    90   5e-16
ref|XP_004165992.1| PREDICTED: vesicle-associated protein 2-2-li...    89   8e-16

>ref|NP_001241309.1| uncharacterized protein LOC100801987 [Glycine max]
           gi|255641982|gb|ACU21258.1| unknown [Glycine max]
          Length = 295

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 40/165 (24%)
 Frame = -2

Query: 760 VIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVVLLSR 581
           V M+AQ ++P  M CKDKFLIQST+V  GT E++ITS +F KD+G++IEE KLRVVL+S 
Sbjct: 68  VTMQAQRMAPPDMLCKDKFLIQSTVVPVGTTEDDITSDMFAKDSGKFIEEKKLRVVLISP 127

Query: 580 SHSPVAM------------------------------------DMKVLKDVQELKQDVEE 509
             SPV +                                    ++K L+  Q++K+D  +
Sbjct: 128 PSSPVLLPVNGDMKHDPSNEINVQKDRLPSGVENIPPPRKVSEEVKGLEPAQDMKEDRAD 187

Query: 508 LNI----TKDVGDGRVAKAEGESKLARDIEELKLKLRKVEAKLNE 386
            +I     ++VGD + AK + +S LA + EELK KL  +++KL E
Sbjct: 188 EDIVPRQAENVGDMKPAKDDVQSNLANESEELKSKLSVMDSKLRE 232


>ref|NP_001239873.1| uncharacterized protein LOC100794670 [Glycine max]
           gi|255634614|gb|ACU17669.1| unknown [Glycine max]
          Length = 295

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 40/163 (24%)
 Frame = -2

Query: 760 VIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVVLLSR 581
           V M+AQ ++P  M CKDKFLIQST+V  GT E++ITS +F+KD+G+YIEE KLRVVL+S 
Sbjct: 68  VTMQAQRMAPPDMLCKDKFLIQSTVVPFGTTEDDITSDMFSKDSGKYIEEKKLRVVLISP 127

Query: 580 SHSPVAM------------------------------------DMKVLKDVQELKQDVEE 509
             SPV +                                    ++K L+  Q++K+D E+
Sbjct: 128 PSSPVLLPVNGDMKHDPSNEIYVQKDRVPSGVENIPPPCKVSDEVKGLEPAQDMKEDRED 187

Query: 508 LNI----TKDVGDGRVAKAEGESKLARDIEELKLKLRKVEAKL 392
            +I     ++VGD + AK + +  L  + EELK KL  +++KL
Sbjct: 188 EDIVPRQAENVGDMKPAKDDMQLNLTNESEELKSKLSVMDSKL 230


>ref|XP_002277190.1| PREDICTED: vesicle-associated protein 2-2 [Vitis vinifera]
           gi|297736920|emb|CBI26121.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 64/174 (36%), Positives = 85/174 (48%), Gaps = 49/174 (28%)
 Frame = -2

Query: 760 VIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVVLLSR 581
           V M+AQ V+P  M+CKDKFLIQST+V  GT E +I S +F KD+G+Y+EE KLRVVL+  
Sbjct: 66  VTMQAQRVAPPDMQCKDKFLIQSTVVPYGTTETDIRSDMFAKDSGKYLEEKKLRVVLIGP 125

Query: 580 SHSPVAMDMK------------------------------VLKDVQELK----------- 524
           +HSPV + +                               V KDV+  K           
Sbjct: 126 AHSPVLLPLNGLLKQDPCHENFSQKDQLLSGVENTPPAHVVAKDVEGFKTAKVTDESRAA 185

Query: 523 --------QDVEELNITKDVGDGRVAKAEGESKLARDIEELKLKLRKVEAKLNE 386
                   +DV+EL +T D+          +  LA+DIEEL  KL  VE  L+E
Sbjct: 186 KDVESRPAEDVDELKLTNDI---------AKENLAKDIEELNSKLNVVELNLSE 230


>ref|XP_002516861.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223543949|gb|EEF45475.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 304

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 63/165 (38%), Positives = 87/165 (52%), Gaps = 40/165 (24%)
 Frame = -2

Query: 760 VIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVVLLSR 581
           V M+AQ V+P    CKDKFL+QSTIV  GT +E+ITS +F+K++G+YIEE KLRVVL + 
Sbjct: 69  VTMQAQKVAPPDFLCKDKFLVQSTIVPFGTTDEDITSGMFSKESGKYIEEKKLRVVLTNA 128

Query: 580 SHSPVAM------------DMKVLKDV-----------QELKQD---------VEELNIT 497
             SPV +            D  + KD+           + L +D         +EEL   
Sbjct: 129 PTSPVLLPNNGELKKDPFYDTSLHKDISQNGIENIPPPERLDEDISSFQSAKVIEELKTV 188

Query: 496 K--------DVGDGRVAKAEGESKLARDIEELKLKLRKVEAKLNE 386
           K        D  +   AK   E+KL +D EELK +L  +++KL E
Sbjct: 189 KDEESRPADDAEELESAKDVVEAKLVKDFEELKTRLHLMDSKLRE 233


>ref|XP_004165992.1| PREDICTED: vesicle-associated protein 2-2-like [Cucumis sativus]
          Length = 394

 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 12/126 (9%)
 Frame = -2

Query: 763 AVIMEAQWVSPLGMKCKDKFLIQSTIVFSGTKEEEITSRLFTKDNGRYIEESKLRVVLLS 584
           +VIM+AQ  +P  M CKDKFLIQSTIV SG  EE+IT+ +F+KD G+YIEE KL+V L+S
Sbjct: 67  SVIMQAQRAAPPDMLCKDKFLIQSTIVPSGITEEDITASMFSKDGGKYIEEDKLKVALIS 126

Query: 583 RSHSPV------AMDMKVLKDVQELKQDVEEL------NITKDVGDGRVAKAEGESKLAR 440
             +SP+      A+D + + DV +L +D   L      N T  + D   A  EGE    R
Sbjct: 127 PLNSPILSPSDGALDAR-MDDVMKLNEDSGPLSDGMDTNETPKLKDQNGASDEGE----R 181

Query: 439 DIEELK 422
            IE LK
Sbjct: 182 TIEALK 187


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