BLASTX nr result

ID: Coptis25_contig00024239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024239
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888688.1| hypothetical protein ARALYDRAFT_894668 [Arab...    57   2e-06

>ref|XP_002888688.1| hypothetical protein ARALYDRAFT_894668 [Arabidopsis lyrata subsp.
           lyrata] gi|297334529|gb|EFH64947.1| hypothetical protein
           ARALYDRAFT_894668 [Arabidopsis lyrata subsp. lyrata]
          Length = 59

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = +1

Query: 22  MLGLFSFQCMIDMLVAGISLVIGLGFFAFVASILCSAAFLFNAK 153
           M+G+ S Q  +D++VAG SL+IG GFFA +AS+LCS AF  + K
Sbjct: 1   MMGIVSIQTAMDLIVAGFSLIIGFGFFALIASVLCSVAFFHHVK 44


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