BLASTX nr result

ID: Coptis25_contig00024223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024223
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310898.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
emb|CBI18358.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002270513.1| PREDICTED: uncharacterized protein LOC100256...   152   4e-35
ref|XP_004140725.1| PREDICTED: uncharacterized protein LOC101203...   150   2e-34
ref|NP_001143276.1| uncharacterized protein LOC100275809 precurs...   147   1e-33

>ref|XP_002310898.1| predicted protein [Populus trichocarpa] gi|222853801|gb|EEE91348.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  153 bits (387), Expect = 2e-35
 Identities = 71/104 (68%), Positives = 83/104 (79%), Gaps = 8/104 (7%)
 Frame = -2

Query: 393 QQEGIDTDTFANVPQTLSG--------EDYKKARIQHPKSKDAERCTVKCVTTCIRGGAG 238
           QQ+  +T+T +N+PQTLSG        +D KKARIQ PKS+ AE CT+KCVTTCIRGG G
Sbjct: 56  QQQQAETETLSNIPQTLSGGECASVSPKDCKKARIQRPKSRKAESCTIKCVTTCIRGGEG 115

Query: 237 SPGEGPLNARRPLVVFKEGFHSRKYCLVECSDICNLLKDGEDGP 106
           SPGEGPLN RRP+VVFK+GF SR YCLVECSDICNL+ D +DGP
Sbjct: 116 SPGEGPLNVRRPIVVFKQGFRSRNYCLVECSDICNLIGDADDGP 159


>emb|CBI18358.3| unnamed protein product [Vitis vinifera]
          Length = 110

 Score =  152 bits (385), Expect = 4e-35
 Identities = 71/94 (75%), Positives = 80/94 (85%), Gaps = 5/94 (5%)
 Frame = -2

Query: 372 DTFANVPQTLSGE-----DYKKARIQHPKSKDAERCTVKCVTTCIRGGAGSPGEGPLNAR 208
           +T +N+PQTLSGE     D KKARIQ PKS+ AE CT+KCVTTCIRGG GSPGEGPLN R
Sbjct: 17  ETLSNIPQTLSGECPSVQDCKKARIQRPKSRKAESCTIKCVTTCIRGGDGSPGEGPLNIR 76

Query: 207 RPLVVFKEGFHSRKYCLVECSDICNLLKDGEDGP 106
           RPLVVFK+GF SR+YCLVECSDICNL+ DG+DGP
Sbjct: 77  RPLVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 110


>ref|XP_002270513.1| PREDICTED: uncharacterized protein LOC100256402 [Vitis vinifera]
          Length = 172

 Score =  152 bits (385), Expect = 4e-35
 Identities = 71/94 (75%), Positives = 80/94 (85%), Gaps = 5/94 (5%)
 Frame = -2

Query: 372 DTFANVPQTLSGE-----DYKKARIQHPKSKDAERCTVKCVTTCIRGGAGSPGEGPLNAR 208
           +T +N+PQTLSGE     D KKARIQ PKS+ AE CT+KCVTTCIRGG GSPGEGPLN R
Sbjct: 79  ETLSNIPQTLSGECPSVQDCKKARIQRPKSRKAESCTIKCVTTCIRGGDGSPGEGPLNIR 138

Query: 207 RPLVVFKEGFHSRKYCLVECSDICNLLKDGEDGP 106
           RPLVVFK+GF SR+YCLVECSDICNL+ DG+DGP
Sbjct: 139 RPLVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 172


>ref|XP_004140725.1| PREDICTED: uncharacterized protein LOC101203967 [Cucumis sativus]
           gi|449486623|ref|XP_004157350.1| PREDICTED:
           uncharacterized protein LOC101224914 [Cucumis sativus]
          Length = 171

 Score =  150 bits (379), Expect = 2e-34
 Identities = 72/101 (71%), Positives = 83/101 (82%), Gaps = 5/101 (4%)
 Frame = -2

Query: 393 QQEGIDTDTFANVPQTLSGE-----DYKKARIQHPKSKDAERCTVKCVTTCIRGGAGSPG 229
           QQE  ++ T +N+PQTLSGE     D KKARIQ PKS+ AE CT+KCV TCIRGG GSPG
Sbjct: 73  QQE--ESSTLSNIPQTLSGECAQPSDCKKARIQRPKSRKAESCTIKCVGTCIRGGDGSPG 130

Query: 228 EGPLNARRPLVVFKEGFHSRKYCLVECSDICNLLKDGEDGP 106
           EGPLN RRP+VVFK+GF SR+YCLVECSDICNL+ DG+DGP
Sbjct: 131 EGPLNIRRPIVVFKQGFRSRQYCLVECSDICNLIGDGDDGP 171


>ref|NP_001143276.1| uncharacterized protein LOC100275809 precursor [Zea mays]
           gi|195616942|gb|ACG30301.1| hypothetical protein [Zea
           mays]
          Length = 114

 Score =  147 bits (371), Expect = 1e-33
 Identities = 65/89 (73%), Positives = 76/89 (85%)
 Frame = -2

Query: 372 DTFANVPQTLSGEDYKKARIQHPKSKDAERCTVKCVTTCIRGGAGSPGEGPLNARRPLVV 193
           DTF+NVP TLSG D K+ RI+HP+S  A +CT KCV TCIRGG G+PGEGPLN RRPLVV
Sbjct: 26  DTFSNVPPTLSGGDGKQERIKHPRSAKALQCTTKCVGTCIRGGGGAPGEGPLNVRRPLVV 85

Query: 192 FKEGFHSRKYCLVECSDICNLLKDGEDGP 106
           FK+GF SR+YCL+ECSDICN +KDG+DGP
Sbjct: 86  FKDGFRSRQYCLIECSDICNRIKDGQDGP 114


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