BLASTX nr result

ID: Coptis25_contig00024221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024221
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167686.1| PREDICTED: protoporphyrinogen oxidase, chlor...   169   3e-40
ref|XP_004138461.1| PREDICTED: protoporphyrinogen oxidase, chlor...   169   3e-40
ref|XP_002509548.1| amine oxidase, putative [Ricinus communis] g...   167   1e-39
ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc...   166   2e-39
ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39

>ref|XP_004167686.1| PREDICTED: protoporphyrinogen oxidase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/132 (65%), Positives = 101/132 (76%)
 Frame = +3

Query: 3   VGGKLKSVSRDGLIWDEGANTMLESEMEVTRILDNAGLRGKQQFPISANKRYIVRNGQPE 182
           VGGKL+SVS  GLIWDEGANTM ESE EV  +LD+ GLR KQQFPIS NKRYIVRNG P 
Sbjct: 48  VGGKLRSVSYKGLIWDEGANTMTESEPEVQCLLDDLGLREKQQFPISQNKRYIVRNGVPV 107

Query: 183 ILPTTFFGFMKSNFLSTKSKFQLFMEPFLWRSYVENVVSLEASNEDSKRSVRDFFERHFG 362
           ++PT     +KSNFLS KSKFQ+ +EPFLW+ Y  + VS + ++E    SV  FF+RHFG
Sbjct: 108 LVPTNPIALIKSNFLSAKSKFQIILEPFLWKKYDSSKVSDDGTDE----SVGGFFQRHFG 163

Query: 363 KEVVDYLIDPFV 398
           +EVVDYLIDP V
Sbjct: 164 QEVVDYLIDPIV 175


>ref|XP_004138461.1| PREDICTED: protoporphyrinogen oxidase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 497

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/132 (65%), Positives = 101/132 (76%)
 Frame = +3

Query: 3   VGGKLKSVSRDGLIWDEGANTMLESEMEVTRILDNAGLRGKQQFPISANKRYIVRNGQPE 182
           VGGKL+SVS  GLIWDEGANTM ESE EV  +LD+ GLR KQQFPIS NKRYIVRNG P 
Sbjct: 43  VGGKLRSVSYKGLIWDEGANTMTESEPEVQCLLDDLGLREKQQFPISQNKRYIVRNGVPV 102

Query: 183 ILPTTFFGFMKSNFLSTKSKFQLFMEPFLWRSYVENVVSLEASNEDSKRSVRDFFERHFG 362
           ++PT     +KSNFLS KSKFQ+ +EPFLW+ Y  + VS + ++E    SV  FF+RHFG
Sbjct: 103 LVPTNPIALIKSNFLSAKSKFQIILEPFLWKKYDSSKVSDDGTDE----SVGGFFQRHFG 158

Query: 363 KEVVDYLIDPFV 398
           +EVVDYLIDP V
Sbjct: 159 QEVVDYLIDPIV 170


>ref|XP_002509548.1| amine oxidase, putative [Ricinus communis]
           gi|223549447|gb|EEF50935.1| amine oxidase, putative
           [Ricinus communis]
          Length = 511

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/131 (62%), Positives = 99/131 (75%)
 Frame = +3

Query: 6   GGKLKSVSRDGLIWDEGANTMLESEMEVTRILDNAGLRGKQQFPISANKRYIVRNGQPEI 185
           GGKL+SV+ DGLIWDEGANTM ESEMEV  ++ N G+R KQQFPIS NKRYIVRNG+P +
Sbjct: 50  GGKLRSVNHDGLIWDEGANTMTESEMEVKSLIGNLGIREKQQFPISQNKRYIVRNGKPIL 109

Query: 186 LPTTFFGFMKSNFLSTKSKFQLFMEPFLWRSYVENVVSLEASNEDSKRSVRDFFERHFGK 365
           +PT     + SN LS +SKFQ+ +EPFLW+       S E  N  ++ SV +FF+RHFGK
Sbjct: 110 IPTNPIALITSNILSAQSKFQIILEPFLWKKR----ESSETHNAYTEESVGEFFQRHFGK 165

Query: 366 EVVDYLIDPFV 398
           EVVDYLIDPFV
Sbjct: 166 EVVDYLIDPFV 176


>ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis
           vinifera] gi|296090240|emb|CBI40059.3| unnamed protein
           product [Vitis vinifera]
          Length = 508

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/131 (64%), Positives = 99/131 (75%)
 Frame = +3

Query: 6   GGKLKSVSRDGLIWDEGANTMLESEMEVTRILDNAGLRGKQQFPISANKRYIVRNGQPEI 185
           GGKL+SVS+ GL+WDEGANTM ESE+EV  +LDN  LR KQQFPIS NKRYIVRNG P +
Sbjct: 51  GGKLRSVSQHGLVWDEGANTMTESEIEVGSLLDNLRLREKQQFPISQNKRYIVRNGMPVL 110

Query: 186 LPTTFFGFMKSNFLSTKSKFQLFMEPFLWRSYVENVVSLEASNEDSKRSVRDFFERHFGK 365
           LP+     +KSN LS KSKFQ+ +EPFLW+    + V    S++  K SV  FF+RHFGK
Sbjct: 111 LPSNPIALIKSNILSAKSKFQIILEPFLWKKSDLSKV----SDDHMKESVGGFFQRHFGK 166

Query: 366 EVVDYLIDPFV 398
           EVVDYLIDPFV
Sbjct: 167 EVVDYLIDPFV 177


>ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|222845865|gb|EEE83412.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/131 (61%), Positives = 99/131 (75%)
 Frame = +3

Query: 6   GGKLKSVSRDGLIWDEGANTMLESEMEVTRILDNAGLRGKQQFPISANKRYIVRNGQPEI 185
           GGKL+SVS   L+WDEGANTM ESE+EV  +LD+ GLR KQQFPI+ NKRYIVRNG P +
Sbjct: 51  GGKLRSVSHHDLVWDEGANTMTESEVEVKSLLDDLGLREKQQFPIAQNKRYIVRNGMPVL 110

Query: 186 LPTTFFGFMKSNFLSTKSKFQLFMEPFLWRSYVENVVSLEASNEDSKRSVRDFFERHFGK 365
           +PT     +KSNFLS +SK Q+ +EPFLW+       S + S+ D + SV +FF+RHFGK
Sbjct: 111 IPTNPVALIKSNFLSAQSKLQIILEPFLWKKN----ESSKVSDADIQESVGEFFQRHFGK 166

Query: 366 EVVDYLIDPFV 398
           EVVDYLIDPFV
Sbjct: 167 EVVDYLIDPFV 177


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