BLASTX nr result

ID: Coptis25_contig00024220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024220
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313782.1| predicted protein [Populus trichocarpa] gi|2...   258   5e-67
ref|XP_002305440.1| predicted protein [Populus trichocarpa] gi|2...   256   2e-66
ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245...   248   7e-64
ref|XP_002512942.1| Sec14 cytosolic factor, putative [Ricinus co...   248   7e-64
ref|XP_003523514.1| PREDICTED: patellin-3-like [Glycine max]          247   1e-63

>ref|XP_002313782.1| predicted protein [Populus trichocarpa] gi|222850190|gb|EEE87737.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  258 bits (660), Expect = 5e-67
 Identities = 121/147 (82%), Positives = 140/147 (95%)
 Frame = +2

Query: 221 ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTIEDEHDAEELQAVD 400
           +D E+SEDER+TK+GS KKKAI+AS KFRNSLTKKGRRHSRVMS++IED+ DAEELQAVD
Sbjct: 4   SDTEHSEDERKTKLGSLKKKAISASNKFRNSLTKKGRRHSRVMSISIEDDLDAEELQAVD 63

Query: 401 AFRQALILDELLPSRHDDYHMMLRFLKARKFDIEKTKQMWADMLRWRNDFGADTIMEDFE 580
           AFRQALILDELLPS+HDD+HMMLRFL+ARKFD+EK KQMW+DML+WR +FGADTIME+FE
Sbjct: 64  AFRQALILDELLPSKHDDHHMMLRFLRARKFDVEKAKQMWSDMLKWRKEFGADTIMEEFE 123

Query: 581 FKEISEVLEHYPQGHHGVDKEGRPVYI 661
           FKEI EVL++YPQG+HGVDKEGRPVYI
Sbjct: 124 FKEIDEVLKYYPQGYHGVDKEGRPVYI 150


>ref|XP_002305440.1| predicted protein [Populus trichocarpa] gi|222848404|gb|EEE85951.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score =  256 bits (655), Expect = 2e-66
 Identities = 125/163 (76%), Positives = 143/163 (87%), Gaps = 2/163 (1%)
 Frame = +2

Query: 179 TIMTDLDRASRPG--PADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMS 352
           T+   LDR  + G   +D E SED+R+TK+GS KKKAI+AS KFRNSLTK+GRRHSRVMS
Sbjct: 41  TMSGPLDRDIKGGLEKSDAEYSEDDRKTKLGSLKKKAISASNKFRNSLTKRGRRHSRVMS 100

Query: 353 VTIEDEHDAEELQAVDAFRQALILDELLPSRHDDYHMMLRFLKARKFDIEKTKQMWADML 532
           + IED  +AEELQAVDAFRQALILDELLPS+HDD+HMMLRFL+ARKFDIEK KQMW+DML
Sbjct: 101 IAIEDNLNAEELQAVDAFRQALILDELLPSKHDDHHMMLRFLRARKFDIEKAKQMWSDML 160

Query: 533 RWRNDFGADTIMEDFEFKEISEVLEHYPQGHHGVDKEGRPVYI 661
            WR +FGADTIMEDFEFKEI EVL+HYPQG+HG+DKEGRPVYI
Sbjct: 161 SWRKEFGADTIMEDFEFKEIDEVLKHYPQGYHGIDKEGRPVYI 203


>ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245225, partial [Vitis
           vinifera]
          Length = 619

 Score =  248 bits (633), Expect = 7e-64
 Identities = 118/148 (79%), Positives = 138/148 (93%), Gaps = 1/148 (0%)
 Frame = +2

Query: 221 ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTIE-DEHDAEELQAV 397
           +D+ENSEDER+ K+G+FKKKAI AS+KFRNSLTKKGRR+S+VM++ +E D+ DAEELQAV
Sbjct: 6   SDIENSEDERKKKMGTFKKKAITASSKFRNSLTKKGRRNSKVMNIAVEEDDLDAEELQAV 65

Query: 398 DAFRQALILDELLPSRHDDYHMMLRFLKARKFDIEKTKQMWADMLRWRNDFGADTIMEDF 577
           DAFRQALIL+ELLPS+HDD  +MLRFLKARKFDIEKTKQMWADM+ WR +FGADTIMEDF
Sbjct: 66  DAFRQALILEELLPSKHDDSRVMLRFLKARKFDIEKTKQMWADMINWRKEFGADTIMEDF 125

Query: 578 EFKEISEVLEHYPQGHHGVDKEGRPVYI 661
           EFKEI +VLE+YPQGHHGVDK+GRPVYI
Sbjct: 126 EFKEIDDVLEYYPQGHHGVDKDGRPVYI 153


>ref|XP_002512942.1| Sec14 cytosolic factor, putative [Ricinus communis]
           gi|223547953|gb|EEF49445.1| Sec14 cytosolic factor,
           putative [Ricinus communis]
          Length = 555

 Score =  248 bits (633), Expect = 7e-64
 Identities = 117/158 (74%), Positives = 140/158 (88%), Gaps = 2/158 (1%)
 Frame = +2

Query: 194 LDRASRPGP--ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTIED 367
           LDR  + GP  +D +N EDER+T++ + KKKAINAS KFRNSLTKKGRRHSRVMSV IED
Sbjct: 11  LDRHIKAGPEKSDTDNVEDERKTRLAALKKKAINASNKFRNSLTKKGRRHSRVMSVAIED 70

Query: 368 EHDAEELQAVDAFRQALILDELLPSRHDDYHMMLRFLKARKFDIEKTKQMWADMLRWRND 547
           + +AEELQAVDAFRQ LILDELLPS+HDD+H+MLRFLKARKFD EK KQMW+DML+WR +
Sbjct: 71  DINAEELQAVDAFRQVLILDELLPSKHDDHHLMLRFLKARKFDAEKAKQMWSDMLQWRKE 130

Query: 548 FGADTIMEDFEFKEISEVLEHYPQGHHGVDKEGRPVYI 661
           FG DTI+EDFEF+E+ EV+++YPQG+HG+DKEGRPVYI
Sbjct: 131 FGTDTIIEDFEFQELDEVVKYYPQGYHGIDKEGRPVYI 168


>ref|XP_003523514.1| PREDICTED: patellin-3-like [Glycine max]
          Length = 574

 Score =  247 bits (631), Expect = 1e-63
 Identities = 114/146 (78%), Positives = 137/146 (93%)
 Frame = +2

Query: 224 DVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTIEDEHDAEELQAVDA 403
           ++E SEDER+ K+GSFKK AI+AS+KF++S  K+GRRHSRVMSV+IED+ DAEELQAVDA
Sbjct: 18  EIEYSEDERKKKLGSFKKVAISASSKFKHSFAKRGRRHSRVMSVSIEDDLDAEELQAVDA 77

Query: 404 FRQALILDELLPSRHDDYHMMLRFLKARKFDIEKTKQMWADMLRWRNDFGADTIMEDFEF 583
           FRQALIL+ELLP++HDD+HMMLRFL+ARKFDIEKTKQMWADML+WR +FGADTIMEDFEF
Sbjct: 78  FRQALILEELLPAKHDDHHMMLRFLRARKFDIEKTKQMWADMLKWRQEFGADTIMEDFEF 137

Query: 584 KEISEVLEHYPQGHHGVDKEGRPVYI 661
            E+ EVL++YPQGHHG+DK+GRPVYI
Sbjct: 138 NELEEVLKYYPQGHHGIDKDGRPVYI 163


Top