BLASTX nr result
ID: Coptis25_contig00024213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00024213
(1565 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631270.1| PREDICTED: transcription factor bHLH90-like ... 234 4e-59
emb|CBI37859.3| unnamed protein product [Vitis vinifera] 201 4e-49
ref|XP_002521283.1| hypothetical protein RCOM_0978110 [Ricinus c... 199 2e-48
ref|XP_002884023.1| hypothetical protein ARALYDRAFT_480571 [Arab... 194 7e-47
ref|NP_179283.2| transcription factor ABORTED MICROSPORES [Arabi... 192 2e-46
>ref|XP_003631270.1| PREDICTED: transcription factor bHLH90-like [Vitis vinifera]
Length = 481
Score = 234 bits (598), Expect = 4e-59
Identities = 178/466 (38%), Positives = 241/466 (51%), Gaps = 33/466 (7%)
Frame = -2
Query: 1300 MGSLKRVLERLRHLVGKNGWDYCVVWKLEDYPTSFIELMDCCC---VGAKEVQVKEEEEM 1130
M L++ +E LR LV K WDYCVVWKL D P+ F+E MDCCC G V+V+ E +
Sbjct: 1 MRGLEKAMEWLRPLVEKKTWDYCVVWKLGDDPSRFVEWMDCCCGGGYGLANVKVEREGQH 60
Query: 1129 LHQLCLDTAFPHPKRTKACDALASLPSTIPLSIGIHGEVLVTGQPKWIS---------CD 977
L LC D HP RT+AC+ALA PS +PL GIHGEV+V+ QP+W+S
Sbjct: 61 LPPLCRDRYSQHPVRTRACEALAQFPSFMPLYSGIHGEVVVSTQPRWLSHGTALDSNLSH 120
Query: 976 EPLGTRALIPVIGGLVEFFAGRQVPKDQQMIELIMVQCNISLEQEP---TVVSTDDNLKE 806
E +GT+ LIPV+GGL+E F + VPKDQ +I+ + QC+ISLEQE VS ++N +
Sbjct: 121 EFVGTQVLIPVVGGLIELFIAKHVPKDQNIIDFVKAQCHISLEQEVRSCNSVSPNENSLD 180
Query: 805 QLLEGCMYDLPP-LDDGNRNLPLRMIDQFF-------LEGSSTGSIHFEESLSFGSNPIS 650
LL +LPP L + L L+ + EGSS S E S S+
Sbjct: 181 PLLGKYADNLPPPLLHLSSILQLQFLPPATQPSMLCGFEGSSNVSDRLNEHPSLDSSSCL 240
Query: 649 A-----CQRVVELDQSFGTT---SPELVVESLGSIQPDHNGIIRQKKSSISHCGNNKECY 494
A +R +E SF T + L+ + LG G++ S+ E
Sbjct: 241 APRHKSLKRPIE-KSSFSTDHHYNETLLKQQLGL----GLGLV----SATPMVEKENEKA 291
Query: 493 MRRVEGDSRKSRNLVVEXXXXXXXXXXXXXXRSLVPTITKMDIQSTLGDAISFIEELQKK 314
++ E + S+NL+ E R+LVP I+KMD S LGDAI +I ELQ++
Sbjct: 292 RQKPESEQYHSKNLITERNRRNRIKDGLFTLRALVPKISKMDRASILGDAIQYIVELQQE 351
Query: 313 VKALQDEVKDMXXXXXXXXXELQFQKVAAKWKTEEYVTSHFSPSDISTEQLKHNQDSSIV 134
VK LQDEV Q+ E +S +SP+ +TE HN+ SS +
Sbjct: 352 VKKLQDEVN-------------MEQEDCNMKDAELKRSSRYSPA--TTE---HNRGSSSI 393
Query: 133 NDLAQQMDEK--VEVSQSGRNEFSLKLIFEQQRGWFRRLMEAMNAL 2
+ Q ++ VEV G EF LKL+ EQ+RG F RLMEA+N L
Sbjct: 394 REKKQIESQRVQVEVKLIGTREFLLKLLCEQKRGGFARLMEAINVL 439
>emb|CBI37859.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 201 bits (511), Expect = 4e-49
Identities = 145/457 (31%), Positives = 227/457 (49%), Gaps = 27/457 (5%)
Frame = -2
Query: 1291 LKRVLERLRHLVG--KNGWDYCVVWKLEDYPTSFIELMDCCCVGAKEVQVKEE-EEMLHQ 1121
++ ++ERLR LVG WDYCV+WKL + F++ MDCCC G E + EE L
Sbjct: 40 VQSLMERLRPLVGLKSRDWDYCVLWKLSE-DQRFLDWMDCCCAGGGENSTQNGGEEHLFP 98
Query: 1120 L-----CLDTAFPHPKRTKACDALASLPSTIPLSIGIHGEVLVTGQPKWIS--------- 983
+ C D HP RTK+CD LA LPS+I L GIHG+ L++ QP+W++
Sbjct: 99 VSSVLPCRDAMSQHP-RTKSCDLLAQLPSSISLDSGIHGQTLISNQPRWLNFCNSSDSSI 157
Query: 982 CDEPLGTRALIPVIGGLVEFFAGRQVPKDQQMIELIMVQCN-ISLEQEPTVVSTDDN-LK 809
+E +GT LIPV+GGL+E F +QV +DQ +I + QC+ IS+EQE + S++ N +
Sbjct: 158 LEETVGTGLLIPVLGGLIELFVAKQVAEDQHVINFVTTQCHMISMEQEAMMNSSNINSIF 217
Query: 808 EQLLEGCMYDLPPLDDGNRNLPLRMIDQFFLEGSSTGSIHFEESLSFGSNPISACQRVVE 629
+ G D D N F S ++ L + I C +
Sbjct: 218 SVNVNGGNADENQKDPNNH---------FQAPISPVTAMEDLNDLPISVDQIRLCSSPMN 268
Query: 628 LDQSFGTTSPELVVESLGSIQPDHNGIIRQKKS----SISHCGN----NKECYMRRVEGD 473
Q F TS + + DH + ++ + S+S C + + + +R G
Sbjct: 269 FLQQFSYTSESSIKND--QLGDDHKDLSAKRTANQADSVSDCSDQIDDDDDLKFQRRTGK 326
Query: 472 SRKSRNLVVEXXXXXXXXXXXXXXRSLVPTITKMDIQSTLGDAISFIEELQKKVKALQDE 293
+S+N+ E RSLVP I+K+D S LGDAI F++ELQK+ K LQDE
Sbjct: 327 GAQSKNIDAERRRRKKLNDRLYALRSLVPKISKLDRASILGDAIEFVKELQKQAKDLQDE 386
Query: 292 VKDMXXXXXXXXXELQFQKVAAKWKTEEYVTSHFSPSDISTEQLKHNQDSSIVNDLAQQM 113
+++ + + ++ ++ + + ++++ I +D AQQM
Sbjct: 387 LEENSEDEVNIGPKTENEETQNRFLMGAAGNGIAASACRPPSAKQNHETDQITDDKAQQM 446
Query: 112 DEKVEVSQSGRNEFSLKLIFEQQRGWFRRLMEAMNAL 2
+ +VEV+Q N+F +K+ E + G F RLMEA+++L
Sbjct: 447 EPQVEVAQIEGNDFFVKVFCEHKAGGFVRLMEALSSL 483
>ref|XP_002521283.1| hypothetical protein RCOM_0978110 [Ricinus communis]
gi|223539551|gb|EEF41139.1| hypothetical protein
RCOM_0978110 [Ricinus communis]
Length = 593
Score = 199 bits (506), Expect = 2e-48
Identities = 150/503 (29%), Positives = 233/503 (46%), Gaps = 77/503 (15%)
Frame = -2
Query: 1279 LERLRHLVGKNGWDYCVVWKLEDYPTSFIELMDCCCVGAKEVQVKEEEEMLHQL-----C 1115
+ERLR LVG GWDYCV+W L D ++E MDCCC G + QV EE+ + C
Sbjct: 1 MERLRPLVGFKGWDYCVLWILSD-DQRYLEWMDCCCGGTENTQVNGGEELQFPVSSVLPC 59
Query: 1114 LDTAFPHPKRTKACDALASLPSTIPLSIGIHGEVLVTGQPKWISCDE------PLGTRAL 953
D F HP RTK+C+ LA L S++PL GIH + L++ +P+WI+ +GTRAL
Sbjct: 60 RDIIFQHP-RTKSCELLARLSSSMPLESGIHAQALISNEPRWINFSNNSDLNGTVGTRAL 118
Query: 952 IPVIGGLVEFFAGRQVPKDQQMIELIMVQCNISLEQEPTVVSTD---------------- 821
IPV GGL+E F +QV +DQ I+ + QC I +EQE + ST+
Sbjct: 119 IPVPGGLLELFVTKQVSEDQHAIDFVTTQCTILMEQEAMISSTNIDTGFAVNMKMIGEEQ 178
Query: 820 --------DNLKEQ-LLEGCMYDLPPLDDGNRNL----------------PLRMIDQFFL 716
DN++E+ + P+ NL P+ + QF
Sbjct: 179 SKAYLADHDNMEEKDHTNNNQFQQAPITPALENLNLPYDISADRIRLCSPPMNFLQQFHY 238
Query: 715 EGS------STGSIHFEESLSFGSNPI------SACQRVVELDQSFGTTSPELVVESLGS 572
S I FEE+ + N + +A +++ + + + + S G
Sbjct: 239 SNDQDNKTKSNDHIFFEEAATNSCNGLQDQMDAAASHKIMMMTTNTENMHMKFMEPSSGK 298
Query: 571 IQP----DHNGIIRQ--KKSSISHCGNN----KECYMRRVEGDSRKSRNLVVEXXXXXXX 422
+ D++ I + + S+S C N + RR G ++NL E
Sbjct: 299 KEQQANNDNDSIKHENGRSDSVSDCSNQIDDENDAKYRRRTGRGPPAKNLKAERRRRKRL 358
Query: 421 XXXXXXXRSLVPTITKMDIQSTLGDAISFIEELQKKVKALQDEVKDMXXXXXXXXXELQF 242
R+LVP I+ ++ S LGDAI F++ELQK+ K L++E+++ +
Sbjct: 359 NGRLYDLRALVPKISNLNKASILGDAIEFVKELQKQAKELENELEEHSDDDQGVKNGIHN 418
Query: 241 QKVAAKWKTEEYVTSHF---SPSDISTEQLKHNQDSSIVNDLAQQMDEKVEVSQSGRNEF 71
+ + + F S +S +L H ++S +D QQM+ +VEV+Q NEF
Sbjct: 419 NIPQEILNQDGGIVNGFHVGSSEVVSCSKLNHKSETS--HDKGQQMEVQVEVAQIDGNEF 476
Query: 70 SLKLIFEQQRGWFRRLMEAMNAL 2
+K+ E + G F +LMEA++ L
Sbjct: 477 FVKVFCEHKAGGFMKLMEALDCL 499
>ref|XP_002884023.1| hypothetical protein ARALYDRAFT_480571 [Arabidopsis lyrata subsp.
lyrata] gi|297329863|gb|EFH60282.1| hypothetical protein
ARALYDRAFT_480571 [Arabidopsis lyrata subsp. lyrata]
Length = 571
Score = 194 bits (492), Expect = 7e-47
Identities = 139/472 (29%), Positives = 225/472 (47%), Gaps = 41/472 (8%)
Frame = -2
Query: 1294 SLKRVLERLRHLVGKNGWDYCVVWKLEDYPTSFIELMDCCCVGAKEVQVKEEEEMLHQLC 1115
+++ +LE+LR LVG WDYCV+W+L + F++ M CCC G + + EE + C
Sbjct: 4 NMQNLLEKLRPLVGARAWDYCVLWRLNE-DQRFVKWMGCCCGGTELIAENGTEEFSYGGC 62
Query: 1114 LDTAFPHPKRTKACDALASLPSTIPLSIGIHGEVLVTGQPKWIS-------CDEPLGTRA 956
D F HP RTK+C+ L+ LP++IPL GI+ E L+T Q W+S E + TR
Sbjct: 63 RDVMFHHP-RTKSCEFLSHLPASIPLDSGIYAETLLTNQTGWLSESSEPSFMQETICTRV 121
Query: 955 LIPVIGGLVEFFAGRQVPKDQQMIELIMVQCNISLEQEPTV-VSTDDNLKEQ---LLEGC 788
LIP+ GGLVE FA R V +DQ +++ +M CN+ ++ T+ + D ++ + +L G
Sbjct: 122 LIPIPGGLVELFATRHVAEDQNVVDFVMGHCNMLMDDSVTINMMVADEVESKPYGILSGD 181
Query: 787 MYDLPPLDDGNRNLP--------------LRMIDQFFLEGSSTGSIHFEESLSF------ 668
+ ++ NLP L + + + S + ++L +
Sbjct: 182 IQQKGSKEEEMMNLPSSYDISADQIRLNFLPQMSDYETQHLKMKSDYHHQALGYLSENGN 241
Query: 667 ----GSNPISACQRVVELDQSFGTTSPELVVES---LGSIQPDHNGIIRQKKSSISHCGN 509
G NP +A V D P L+V + + + NG + +
Sbjct: 242 KEMMGMNPFNA----VAEDGIPVIGEPSLLVNEQQVVNDKEMNENGRVDSGSDCSDQIDD 297
Query: 508 NKECYMRRVEGDSRKSRNLVVEXXXXXXXXXXXXXXRSLVPTITKMDIQSTLGDAISFIE 329
+ ++ G +++NL+ E RSLVPTITK+D S LGDAI++++
Sbjct: 298 EDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYKLRSLVPTITKLDRASILGDAINYVK 357
Query: 328 ELQKKVKALQDEVKDMXXXXXXXXXELQFQKVAAKWKTEEYVTSHFSPS---DISTEQLK 158
ELQ + K LQDE+++ + V + F P + + K
Sbjct: 358 ELQNEAKELQDELEENSETEDGS------NRQQGGMSLNGTVVTGFHPGISCNSNVPNAK 411
Query: 157 HNQDSSIVNDLAQQMDEKVEVSQSGRNEFSLKLIFEQQRGWFRRLMEAMNAL 2
+ D ND Q+M+ +V+V+Q EF +K+I E + G F RLMEA+++L
Sbjct: 412 QDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSL 463
>ref|NP_179283.2| transcription factor ABORTED MICROSPORES [Arabidopsis thaliana]
gi|218563495|sp|Q9ZVX2.2|AMS_ARATH RecName:
Full=Transcription factor ABORTED MICROSPORES; AltName:
Full=Basic helix-loop-helix protein 21; Short=AtbHLH21;
Short=bHLH 21; AltName: Full=Transcription factor EN 48;
AltName: Full=bHLH transcription factor bHLH021
gi|330251459|gb|AEC06553.1| transcription factor ABORTED
MICROSPORES [Arabidopsis thaliana]
Length = 571
Score = 192 bits (489), Expect = 2e-46
Identities = 138/472 (29%), Positives = 224/472 (47%), Gaps = 41/472 (8%)
Frame = -2
Query: 1294 SLKRVLERLRHLVGKNGWDYCVVWKLEDYPTSFIELMDCCCVGAKEVQVKEEEEMLHQLC 1115
+++ +LE+LR LVG WDYCV+W+L + F++ M CCC G + + EE + C
Sbjct: 4 NMQNLLEKLRPLVGARAWDYCVLWRLNE-DQRFVKWMGCCCGGTELIAENGTEEFSYGGC 62
Query: 1114 LDTAFPHPKRTKACDALASLPSTIPLSIGIHGEVLVTGQPKWIS-------CDEPLGTRA 956
D F HP RTK+C+ L+ LP++IPL GI+ E L+T Q W+S E + TR
Sbjct: 63 RDVMFHHP-RTKSCEFLSHLPASIPLDSGIYAETLLTNQTGWLSESSEPSFMQETICTRV 121
Query: 955 LIPVIGGLVEFFAGRQVPKDQQMIELIMVQCNISLEQEPTV-VSTDDNLKEQ---LLEGC 788
LIP+ GGLVE FA R V +DQ +++ +M CN+ ++ T+ + D ++ + +L G
Sbjct: 122 LIPIPGGLVELFATRHVAEDQNVVDFVMGHCNMLMDDSVTINMMVADEVESKPYGMLSGD 181
Query: 787 MYDLPPLDDGNRNLP--------------LRMIDQFFLEGSSTGSIHFEESLSF------ 668
+ ++ NLP L + + + S + ++L +
Sbjct: 182 IQQKGSKEEDMMNLPSSYDISADQIRLNFLPQMSDYETQHLKMKSDYHHQALGYLPENGN 241
Query: 667 ----GSNPISACQRVVELDQSFGTTSPELVVESLGSIQP---DHNGIIRQKKSSISHCGN 509
G NP + VE D P L+V + + NG + +
Sbjct: 242 KEMMGMNPFNT----VEEDGIPVIGEPSLLVNEQQVVNDKDMNENGRVDSGSDCSDQIDD 297
Query: 508 NKECYMRRVEGDSRKSRNLVVEXXXXXXXXXXXXXXRSLVPTITKMDIQSTLGDAISFIE 329
+ ++ G +++NL+ E RSLVP ITK+D S LGDAI++++
Sbjct: 298 EDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVK 357
Query: 328 ELQKKVKALQDEVKDMXXXXXXXXXELQFQKVAAKWKTEEYVTSHFSPS---DISTEQLK 158
ELQ + K LQDE+++ + V + F P + + +K
Sbjct: 358 ELQNEAKELQDELEENSETEDGS------NRPQGGMSLNGTVVTGFHPGLSCNSNVPSVK 411
Query: 157 HNQDSSIVNDLAQQMDEKVEVSQSGRNEFSLKLIFEQQRGWFRRLMEAMNAL 2
+ D ND Q+M+ +V+V+Q EF +K+I E + G F RLMEA+++L
Sbjct: 412 QDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSL 463