BLASTX nr result

ID: Coptis25_contig00024202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024202
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141160.1| PREDICTED: uncharacterized protein LOC101210...   107   1e-21
ref|XP_002276959.1| PREDICTED: uncharacterized protein LOC100265...   107   2e-21
ref|NP_001234996.1| uncharacterized protein LOC100305667 [Glycin...   104   1e-20
emb|CAG23918.1| LIN1 protein [Cicer arietinum]                        103   2e-20
ref|XP_002327442.1| predicted protein [Populus trichocarpa] gi|1...   102   3e-20

>ref|XP_004141160.1| PREDICTED: uncharacterized protein LOC101210601 [Cucumis sativus]
          Length = 147

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/67 (76%), Positives = 57/67 (85%)
 Frame = -3

Query: 545 GFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRKRTHGFLARKATKGGRRVIARRVA 366
           G PSL FFLP+GD SS    MLL PKRT+QPSTI+RKR HGF ARKATKGGR+VIARR+A
Sbjct: 80  GLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRIA 139

Query: 365 KGRARIT 345
           KGR+RIT
Sbjct: 140 KGRSRIT 146


>ref|XP_002276959.1| PREDICTED: uncharacterized protein LOC100265274 [Vitis vinifera]
           gi|297743038|emb|CBI35905.3| unnamed protein product
           [Vitis vinifera]
          Length = 147

 Score =  107 bits (266), Expect = 2e-21
 Identities = 55/67 (82%), Positives = 57/67 (85%)
 Frame = -3

Query: 545 GFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRKRTHGFLARKATKGGRRVIARRVA 366
           G PSL FFLP+GD SS    MLL PKRTYQPS IKRKRTHGF ARKATKGGRRVIARRVA
Sbjct: 82  GLPSLRFFLPDGDSSS--EPMLLFPKRTYQPSHIKRKRTHGFFARKATKGGRRVIARRVA 139

Query: 365 KGRARIT 345
           KGR+RIT
Sbjct: 140 KGRSRIT 146


>ref|NP_001234996.1| uncharacterized protein LOC100305667 [Glycine max]
           gi|255626259|gb|ACU13474.1| unknown [Glycine max]
           gi|255645139|gb|ACU23068.1| unknown [Glycine max]
          Length = 130

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/67 (76%), Positives = 55/67 (82%)
 Frame = -3

Query: 545 GFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRKRTHGFLARKATKGGRRVIARRVA 366
           G PSL FFLP+GD  S  + MLL PKRTYQPS I+RKR HGF ARKATKGGRRVIARR+A
Sbjct: 63  GLPSLRFFLPQGDAPSSDDPMLLFPKRTYQPSVIRRKRNHGFFARKATKGGRRVIARRLA 122

Query: 365 KGRARIT 345
           KGR RIT
Sbjct: 123 KGRFRIT 129


>emb|CAG23918.1| LIN1 protein [Cicer arietinum]
          Length = 134

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/67 (76%), Positives = 54/67 (80%)
 Frame = -3

Query: 545 GFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRKRTHGFLARKATKGGRRVIARRVA 366
           G PSL FFLP GD  S    MLL PKRT+QPSTI+RKR HGF ARKATKGGR+VIARRVA
Sbjct: 67  GLPSLRFFLPNGDAPSSDEPMLLFPKRTFQPSTIRRKRNHGFFARKATKGGRKVIARRVA 126

Query: 365 KGRARIT 345
           KGR RIT
Sbjct: 127 KGRFRIT 133


>ref|XP_002327442.1| predicted protein [Populus trichocarpa] gi|118482233|gb|ABK93044.1|
           unknown [Populus trichocarpa]
           gi|222835996|gb|EEE74417.1| predicted protein [Populus
           trichocarpa]
          Length = 136

 Score =  102 bits (255), Expect = 3e-20
 Identities = 50/67 (74%), Positives = 56/67 (83%)
 Frame = -3

Query: 545 GFPSLPFFLPEGDDSSLSNTMLLLPKRTYQPSTIKRKRTHGFLARKATKGGRRVIARRVA 366
           G PSL FFLP+GD S+    MLL PKRTYQPS I+RKR HGF ARKATKGGRRVIARR+A
Sbjct: 71  GLPSLEFFLPDGDSST--EPMLLFPKRTYQPSVIRRKRKHGFFARKATKGGRRVIARRIA 128

Query: 365 KGRARIT 345
           KGR+R+T
Sbjct: 129 KGRSRVT 135


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