BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024201
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39664.3| unnamed protein product [Vitis vinifera]              194   4e-47
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   194   4e-47
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   191   3e-46
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39

>emb|CBI39664.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  194 bits (493), Expect = 4e-47
 Identities = 98/232 (42%), Positives = 145/232 (62%)
 Frame = -1

Query: 1268 EVFHFLCSKGCTISSSSFDMLVKGTCLSGKLDEAISLYSLAHHSGISCNLDTHNAILLGL 1089
            EVF ++ S GC + SSS DML+KG C++GK+DEAI L  LA +SG SC   ++ AI+LGL
Sbjct: 281  EVFCYMSSNGCALKSSSLDMLMKGICVTGKVDEAIRLLVLACYSGTSCTNASYKAIMLGL 340

Query: 1088 SESRRTKDILLLFSRMVVGGCAFNAETYSVLINSLCLEKMTSECAWLLDQMVDDGIIPCS 909
            S+  +  DIL++ S+M+V GC  + E Y +L+ S+C    T + A   + MV +G++P S
Sbjct: 341  SKLGKDSDILVVLSKMLVEGCILDVEAYCILVQSMCALSRTEDIARFFNLMVSEGLVPDS 400

Query: 908  ETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSLAINKMLIHGLVKEGHKRDACKLLDH 729
            ETV  ++S +  HSQLH ++  + KL S   + + ++  +LI GL+KEG+K +AC+LLD 
Sbjct: 401  ETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYNLLIIGLLKEGYKSEACRLLDL 460

Query: 728  MLDNGWVPDAVTHSLLIXXXXXXXXXXXXXXXXYSEVPDKVSSILVDSFLDT 573
            ML+ GWVPDA TH LLI                 S + DK+ +IL +   +T
Sbjct: 461  MLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENSCMQDKIGNILAEGLRET 512


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62590-like
            [Vitis vinifera]
          Length = 730

 Score =  194 bits (493), Expect = 4e-47
 Identities = 98/232 (42%), Positives = 145/232 (62%)
 Frame = -1

Query: 1268 EVFHFLCSKGCTISSSSFDMLVKGTCLSGKLDEAISLYSLAHHSGISCNLDTHNAILLGL 1089
            EVF ++ S GC + SSS DML+KG C++GK+DEAI L  LA +SG SC   ++ AI+LGL
Sbjct: 499  EVFCYMSSNGCALKSSSLDMLMKGICVTGKVDEAIRLLVLACYSGTSCTNASYKAIMLGL 558

Query: 1088 SESRRTKDILLLFSRMVVGGCAFNAETYSVLINSLCLEKMTSECAWLLDQMVDDGIIPCS 909
            S+  +  DIL++ S+M+V GC  + E Y +L+ S+C    T + A   + MV +G++P S
Sbjct: 559  SKLGKDSDILVVLSKMLVEGCILDVEAYCILVQSMCALSRTEDIARFFNLMVSEGLVPDS 618

Query: 908  ETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSLAINKMLIHGLVKEGHKRDACKLLDH 729
            ETV  ++S +  HSQLH ++  + KL S   + + ++  +LI GL+KEG+K +AC+LLD 
Sbjct: 619  ETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYNLLIIGLLKEGYKSEACRLLDL 678

Query: 728  MLDNGWVPDAVTHSLLIXXXXXXXXXXXXXXXXYSEVPDKVSSILVDSFLDT 573
            ML+ GWVPDA TH LLI                 S + DK+ +IL +   +T
Sbjct: 679  MLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENSCMQDKIGNILAEGLRET 730


>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  191 bits (485), Expect = 3e-46
 Identities = 97/232 (41%), Positives = 144/232 (62%)
 Frame = -1

Query: 1268 EVFHFLCSKGCTISSSSFDMLVKGTCLSGKLDEAISLYSLAHHSGISCNLDTHNAILLGL 1089
            EVF ++ S  C + SSS DML+KG C++GK+DEAI L  LA +SG SC   ++ AI+LGL
Sbjct: 499  EVFCYMSSNRCALKSSSLDMLMKGICVTGKVDEAIRLLVLACYSGTSCTNASYKAIMLGL 558

Query: 1088 SESRRTKDILLLFSRMVVGGCAFNAETYSVLINSLCLEKMTSECAWLLDQMVDDGIIPCS 909
            S+  +  DIL++ S+M+V GC  + E Y +L+ S+C    T + A   + MV +G++P S
Sbjct: 559  SKLGKDSDILVVLSKMLVEGCILDVEAYCILVQSMCALSRTEDIARFFNLMVSEGLVPDS 618

Query: 908  ETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSLAINKMLIHGLVKEGHKRDACKLLDH 729
            ETV  ++S +  HSQLH ++  + KL S   + + ++  +LI GL+KEG+K +AC+LLD 
Sbjct: 619  ETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYNLLIIGLLKEGYKSEACRLLDL 678

Query: 728  MLDNGWVPDAVTHSLLIXXXXXXXXXXXXXXXXYSEVPDKVSSILVDSFLDT 573
            ML+ GWVPDA TH LLI                 S + DK+ +IL +   +T
Sbjct: 679  MLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENSCMQDKIGNILAEGLRET 730


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
            predicted protein [Populus trichocarpa]
          Length = 724

 Score =  176 bits (445), Expect = 1e-41
 Identities = 92/232 (39%), Positives = 147/232 (63%)
 Frame = -1

Query: 1268 EVFHFLCSKGCTISSSSFDMLVKGTCLSGKLDEAISLYSLAHHSGISCNLDTHNAILLGL 1089
            +VF ++    C++ S SF+ML++G C  G L+EA+ L  L ++SG SC+  T N I+LGL
Sbjct: 494  KVFCYMSENRCSLQSLSFNMLIEGVCNMGMLNEAVRLQLLGYNSGTSCSNATCNYIMLGL 553

Query: 1088 SESRRTKDILLLFSRMVVGGCAFNAETYSVLINSLCLEKMTSECAWLLDQMVDDGIIPCS 909
            S+S + K +L   S+M+V G   + E Y +LI S+  +K   +C   L+ MV++G++P S
Sbjct: 554  SKSDKGKHMLAFLSQMLVQGTNLDMEAYCILIQSMIAQKQIKDCTLFLNVMVNEGLVPDS 613

Query: 908  ETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSLAINKMLIHGLVKEGHKRDACKLLDH 729
            +T+Y+++S +A+HSQL+++  +L+KL+S   +   A+  +LI+GL KEG+K +A +LLD 
Sbjct: 614  DTLYKLLSCLANHSQLYLISLSLDKLVSDCEVLDSAMYNILINGLWKEGNKNEAHRLLDL 673

Query: 728  MLDNGWVPDAVTHSLLIXXXXXXXXXXXXXXXXYSEVPDKVSSILVDSFLDT 573
            ML+ GWVPD++TH LLI                 S + D VS ILV+   +T
Sbjct: 674  MLEKGWVPDSMTHGLLIGSGNREGTGKGKLTYVDS-IKDSVSDILVEGLGET 724


>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
            predicted protein [Populus trichocarpa]
          Length = 725

 Score =  169 bits (429), Expect = 1e-39
 Identities = 89/232 (38%), Positives = 137/232 (59%)
 Frame = -1

Query: 1268 EVFHFLCSKGCTISSSSFDMLVKGTCLSGKLDEAISLYSLAHHSGISCNLDTHNAILLGL 1089
            +VF ++    C++ S  F ML+KG C  G + EA+ L SLA++SG SC   T+N ++L L
Sbjct: 494  KVFCYMSENRCSLQSLPFIMLIKGICDMGMIGEAVRLQSLAYNSGTSCVNATYNYVMLRL 553

Query: 1088 SESRRTKDILLLFSRMVVGGCAFNAETYSVLINSLCLEKMTSECAWLLDQMVDDGIIPCS 909
            S+S + + +L   SRM+V G   N E Y +LI SL  +    +C+  L+ M++ G++P S
Sbjct: 554  SKSEQGRHVLAFLSRMLVQGGNLNTEAYCILIQSLIAQNRIKDCSMFLNVMINKGLVPDS 613

Query: 908  ETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSLAINKMLIHGLVKEGHKRDACKLLDH 729
            +T+Y ++S +A HSQL+++  +L+KL S   +   A+  +LI+G+ KEG+K DA +LLD 
Sbjct: 614  DTLYNLLSCLAKHSQLYLISVSLDKLASDCEVLDSAMYNILINGMWKEGNKNDARRLLDL 673

Query: 728  MLDNGWVPDAVTHSLLIXXXXXXXXXXXXXXXXYSEVPDKVSSILVDSFLDT 573
            ML+ GWVPDA+TH LLI                     D V  IL +   +T
Sbjct: 674  MLEKGWVPDAMTHGLLIGSADMEEKGEGMLAYVDLSTKDGVGDILAEGLGET 725