BLASTX nr result

ID: Coptis25_contig00024196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024196
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545160.1| PREDICTED: uncharacterized protein LOC100817...    87   1e-15
ref|XP_002307542.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002528548.1| conserved hypothetical protein [Ricinus comm...    85   5e-15
ref|NP_001237349.1| uncharacterized protein LOC100306089 [Glycin...    83   2e-14
ref|XP_002300883.1| predicted protein [Populus trichocarpa] gi|1...    83   2e-14

>ref|XP_003545160.1| PREDICTED: uncharacterized protein LOC100817215 [Glycine max]
          Length = 139

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 12/137 (8%)
 Frame = -3

Query: 410 SPASMEEETTMGVHDLVQSSKGAMNQKLCSSTKRKIL------RFQKRKTHCVKDSLCCX 249
           SP+SME+E    +   ++      N     +   K L      R + RK   VKD++   
Sbjct: 3   SPSSMEQEDNTIIPTFLRKPAEDQNNNNSPTPSHKSLHVFRRSRRRWRKEVAVKDAVQEE 62

Query: 248 XXXXXXXDKLG------VERRIVALQRLVPGGESLEIDQLFEETAGYILALQGQVKTMKI 87
                   + G      +ER+I ALQR+VPGGESL +D+LF+ETAGYILALQ QVK ++ 
Sbjct: 63  EDEEKEEGEDGGDDREEIERKIHALQRIVPGGESLGVDKLFDETAGYILALQYQVKALRA 122

Query: 86  LTSLFEGLEKENRKIGG 36
           LT  FE LEKE  K GG
Sbjct: 123 LTGFFEKLEKEKTKFGG 139


>ref|XP_002307542.1| predicted protein [Populus trichocarpa] gi|222856991|gb|EEE94538.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = -3

Query: 224 KLGVERRIVALQRLVPGGESLEIDQLFEETAGYILALQGQVKTMKILTSLFEGLEKENRK 45
           K  VER+IVALQR+VPGGE   +D+LFEETA YI+ALQ Q+K M++L    EGLEKE RK
Sbjct: 51  KAEVERKIVALQRIVPGGELFGVDKLFEETADYIMALQCQIKAMRVLAGFLEGLEKEKRK 110

Query: 44  IGG 36
            GG
Sbjct: 111 FGG 113


>ref|XP_002528548.1| conserved hypothetical protein [Ricinus communis]
           gi|223532050|gb|EEF33860.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 139

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/96 (48%), Positives = 65/96 (67%)
 Frame = -3

Query: 323 SSTKRKILRFQKRKTHCVKDSLCCXXXXXXXXDKLGVERRIVALQRLVPGGESLEIDQLF 144
           SS +R+I++ +K+KT  +               +  VE++I+AL+R+VPGGE L ID+LF
Sbjct: 45  SSRRREIMKKKKKKT-VMTSGFQEDEDVNEKEKEDEVEKKILALKRIVPGGECLGIDKLF 103

Query: 143 EETAGYILALQGQVKTMKILTSLFEGLEKENRKIGG 36
           EETA YILALQ Q+K MK L++  EG+EKE RK GG
Sbjct: 104 EETADYILALQCQIKAMKALSNFLEGMEKEKRKFGG 139


>ref|NP_001237349.1| uncharacterized protein LOC100306089 [Glycine max]
           gi|255627509|gb|ACU14099.1| unknown [Glycine max]
          Length = 127

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = -3

Query: 215 VERRIVALQRLVPGGESLEIDQLFEETAGYILALQGQVKTMKILTSLFEGLEKENRKIGG 36
           +ER+I ALQR+VPGGESL +D+LF+ETAGYILALQ QVK ++ LT  F+ LEKE  K GG
Sbjct: 68  IERKIHALQRIVPGGESLGVDKLFDETAGYILALQYQVKALRALTGFFDKLEKEKTKFGG 127


>ref|XP_002300883.1| predicted protein [Populus trichocarpa] gi|118481568|gb|ABK92726.1|
           unknown [Populus trichocarpa]
           gi|222842609|gb|EEE80156.1| predicted protein [Populus
           trichocarpa]
          Length = 139

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/63 (61%), Positives = 49/63 (77%)
 Frame = -3

Query: 224 KLGVERRIVALQRLVPGGESLEIDQLFEETAGYILALQGQVKTMKILTSLFEGLEKENRK 45
           K  V+R+IVALQ ++PGGES  +D+LFEETA YI+ALQ Q+K M++L    EGLEKE RK
Sbjct: 77  KAEVDRKIVALQMIIPGGESFGVDKLFEETADYIMALQCQIKAMRVLAGFLEGLEKEKRK 136

Query: 44  IGG 36
            GG
Sbjct: 137 SGG 139


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