BLASTX nr result
ID: Coptis25_contig00024195
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024195 (790 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACV81697.1| MYBF1 [Vitis vinifera] 75 2e-11 gb|ACT88298.1| R2R3 MYB transcription factor [Vitis vinifera] 75 2e-11 ref|XP_002269995.1| PREDICTED: transcription factor MYB12 [Vitis... 75 2e-11 gb|AAC04718.1| MYB-like DNA-binding domain protein [Gossypium hi... 70 4e-10 dbj|BAM71801.1| R2R3-MYB transcription factor [Gentiana triflora] 65 2e-08 >gb|ACV81697.1| MYBF1 [Vitis vinifera] Length = 367 Score = 74.7 bits (182), Expect = 2e-11 Identities = 39/58 (67%), Positives = 47/58 (81%), Gaps = 1/58 (1%) Frame = +3 Query: 3 RTDNEIKNYWNSHLSRRLHTIRRPSGEDPPTIVMDLAKIGGGCKRK-GRTSRAAMKKN 173 RTDNEIKNYWNSHLSR++H+ RR + E P++V+DLAK+ KRK GRTSR AMKKN Sbjct: 99 RTDNEIKNYWNSHLSRKVHSFRRLTNEG-PSMVIDLAKVTTAHKRKVGRTSRWAMKKN 155 >gb|ACT88298.1| R2R3 MYB transcription factor [Vitis vinifera] Length = 367 Score = 74.7 bits (182), Expect = 2e-11 Identities = 39/58 (67%), Positives = 47/58 (81%), Gaps = 1/58 (1%) Frame = +3 Query: 3 RTDNEIKNYWNSHLSRRLHTIRRPSGEDPPTIVMDLAKIGGGCKRK-GRTSRAAMKKN 173 RTDNEIKNYWNSHLSR++H+ RR + E P++V+DLAK+ KRK GRTSR AMKKN Sbjct: 99 RTDNEIKNYWNSHLSRKVHSFRRLTNEG-PSMVIDLAKVTTAHKRKVGRTSRWAMKKN 155 >ref|XP_002269995.1| PREDICTED: transcription factor MYB12 [Vitis vinifera] gi|297743957|emb|CBI36927.3| unnamed protein product [Vitis vinifera] Length = 367 Score = 74.7 bits (182), Expect = 2e-11 Identities = 39/58 (67%), Positives = 47/58 (81%), Gaps = 1/58 (1%) Frame = +3 Query: 3 RTDNEIKNYWNSHLSRRLHTIRRPSGEDPPTIVMDLAKIGGGCKRK-GRTSRAAMKKN 173 RTDNEIKNYWNSHLSR++H+ RR + E P++V+DLAK+ KRK GRTSR AMKKN Sbjct: 99 RTDNEIKNYWNSHLSRKVHSFRRLTNEG-PSMVIDLAKVTTAHKRKVGRTSRWAMKKN 155 >gb|AAC04718.1| MYB-like DNA-binding domain protein [Gossypium hirsutum] Length = 453 Score = 70.5 bits (171), Expect = 4e-10 Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 1/58 (1%) Frame = +3 Query: 3 RTDNEIKNYWNSHLSRRLHTIRRPSGEDPPTIVMDLAKIGGGCKRK-GRTSRAAMKKN 173 RTDNEIKNYWNSHLSR++H+ RRP + P ++MDL K KRK GRTS +MK+N Sbjct: 99 RTDNEIKNYWNSHLSRKIHSFRRPLTQSMP-VIMDLTKTAVIAKRKGGRTSEGSMKEN 155 >dbj|BAM71801.1| R2R3-MYB transcription factor [Gentiana triflora] Length = 329 Score = 64.7 bits (156), Expect = 2e-08 Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 5/65 (7%) Frame = +3 Query: 3 RTDNEIKNYWNSHLSRRLHTIRRPSG----EDPPTIVMDLAKIGGGCKRKG-RTSRAAMK 167 RTDNEIKNYWNSHLSR++HT RRP G + I+ D+A+ K +G R RA MK Sbjct: 99 RTDNEIKNYWNSHLSRKIHTFRRPVGGRTADTAHAIMADVARKLAMKKLRGVRIRRAEMK 158 Query: 168 KNNRN 182 KNN++ Sbjct: 159 KNNKS 163