BLASTX nr result

ID: Coptis25_contig00024181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024181
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306856.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus ...   374   e-101
ref|XP_004148950.1| PREDICTED: U-box domain-containing protein 3...   371   e-100
ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3...   370   e-100

>ref|XP_002306856.1| predicted protein [Populus trichocarpa] gi|222856305|gb|EEE93852.1|
            predicted protein [Populus trichocarpa]
          Length = 748

 Score =  384 bits (985), Expect = e-104
 Identities = 199/240 (82%), Positives = 214/240 (89%)
 Frame = +1

Query: 1    LISLLYSVKKLTQEHAVTTLLNLSINENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAAT 180
            L+SLLYS  K+TQEHAVT +LNLSINE NK MIAEAGAIEPLIHVL+SGN GAKEN AA 
Sbjct: 508  LLSLLYSEVKITQEHAVTAVLNLSINEENKAMIAEAGAIEPLIHVLRSGNDGAKENSAAA 567

Query: 181  LFSLSVLEEYKIKIGRSAAVKALVDLLESGTLRGKKDAATALFNLSIFHENKVRIVQAGA 360
            LFSLSVLEEYK KIGRS AVKALVDLL  GT+RGKKDAATALFNLSIFHENK RIVQAGA
Sbjct: 568  LFSLSVLEEYKAKIGRSGAVKALVDLLAYGTIRGKKDAATALFNLSIFHENKARIVQAGA 627

Query: 361  VKHLIELMDPDTGMIDKCVALLANLSTIPEGRSAITREGGIPLLVEVLETGSQRGKENVA 540
            VK+L+ELMDP TGM+DK VALLANLSTI EGR AI + GGIPLLVEV+E+GSQRGKEN A
Sbjct: 628  VKYLVELMDPVTGMVDKAVALLANLSTISEGRMAIAKAGGIPLLVEVVESGSQRGKENAA 687

Query: 541  SILLQLCFNSQKFCTLVLQEGAVPPLVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 720
            SIL+QLC NS KFCTLVLQEGAVPPLVALSQ GTPRAKEKA Q+LSHFR+QREG+ GK K
Sbjct: 688  SILMQLCLNSPKFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRSQREGSAGKGK 747


>ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|222843768|gb|EEE81315.1|
            predicted protein [Populus trichocarpa]
          Length = 753

 Score =  376 bits (965), Expect = e-102
 Identities = 196/240 (81%), Positives = 213/240 (88%)
 Frame = +1

Query: 1    LISLLYSVKKLTQEHAVTTLLNLSINENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAAT 180
            L+SLL S  KLTQEHAVT LLNLSINE+NK +IAEAGAIEP+IHVL+SGN GAKEN AA 
Sbjct: 513  LLSLLSSEVKLTQEHAVTALLNLSINEDNKAIIAEAGAIEPIIHVLRSGNNGAKENSAAA 572

Query: 181  LFSLSVLEEYKIKIGRSAAVKALVDLLESGTLRGKKDAATALFNLSIFHENKVRIVQAGA 360
            LFSLSVLEEYK KIGRS AVKALVDLL SGTLRGKKDAAT LFNLSIFHENK RIVQAGA
Sbjct: 573  LFSLSVLEEYKAKIGRSGAVKALVDLLSSGTLRGKKDAATTLFNLSIFHENKARIVQAGA 632

Query: 361  VKHLIELMDPDTGMIDKCVALLANLSTIPEGRSAITREGGIPLLVEVLETGSQRGKENVA 540
            VK+L+ELMDP TGM+DK VALLANLSTI EGR AI + GGIPLLVEV+E+GSQRGKEN A
Sbjct: 633  VKYLVELMDPVTGMVDKAVALLANLSTIGEGRLAIAKAGGIPLLVEVVESGSQRGKENAA 692

Query: 541  SILLQLCFNSQKFCTLVLQEGAVPPLVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 720
            SIL+QLC +S KFCTLVLQEGAVPPLVALSQ GTPRAKEKA Q+LSHFR+QRE + GK +
Sbjct: 693  SILMQLCLSSPKFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRSQREASAGKGR 752


>ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223528306|gb|EEF30352.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 753

 Score =  374 bits (959), Expect = e-101
 Identities = 197/240 (82%), Positives = 210/240 (87%)
 Frame = +1

Query: 1    LISLLYSVKKLTQEHAVTTLLNLSINENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAAT 180
            L+SLLYS  K TQEHAVT LLNLSINE  K+MIAEAGA+EPLIHVLKSGN GAKEN AA 
Sbjct: 513  LLSLLYSGVKQTQEHAVTALLNLSINEEVKSMIAEAGALEPLIHVLKSGNDGAKENSAAA 572

Query: 181  LFSLSVLEEYKIKIGRSAAVKALVDLLESGTLRGKKDAATALFNLSIFHENKVRIVQAGA 360
            LFSLSVLEEYK KIG S AVKALVDLL SGTLRGKKDAATALFNLSI HENK RIVQAGA
Sbjct: 573  LFSLSVLEEYKAKIGCSGAVKALVDLLASGTLRGKKDAATALFNLSILHENKARIVQAGA 632

Query: 361  VKHLIELMDPDTGMIDKCVALLANLSTIPEGRSAITREGGIPLLVEVLETGSQRGKENVA 540
            VK+L+ELMDP TGM+DK VALLANLSTI EGR AI R GGIP LVE++E+GSQRGKEN A
Sbjct: 633  VKYLVELMDPATGMVDKSVALLANLSTIGEGRLAIARAGGIPSLVEIVESGSQRGKENAA 692

Query: 541  SILLQLCFNSQKFCTLVLQEGAVPPLVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 720
            S+LLQLC NS KFCT VLQEGAVPPLVALSQ GT RAKEKA Q+LSHFRNQREG++GK K
Sbjct: 693  SVLLQLCLNSPKFCTFVLQEGAVPPLVALSQSGTLRAKEKAQQLLSHFRNQREGSMGKGK 752


>ref|XP_004148950.1| PREDICTED: U-box domain-containing protein 3-like [Cucumis sativus]
            gi|449524836|ref|XP_004169427.1| PREDICTED: U-box
            domain-containing protein 3-like [Cucumis sativus]
          Length = 775

 Score =  371 bits (953), Expect = e-100
 Identities = 192/240 (80%), Positives = 211/240 (87%)
 Frame = +1

Query: 1    LISLLYSVKKLTQEHAVTTLLNLSINENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAAT 180
            L+SLLYS  KL QEHAVT LLNLSI+ENNK MIAEAGAIEPLIHVLK+G++ AKEN AA+
Sbjct: 536  LLSLLYSEGKLIQEHAVTALLNLSIDENNKAMIAEAGAIEPLIHVLKTGSSAAKENSAAS 595

Query: 181  LFSLSVLEEYKIKIGRSAAVKALVDLLESGTLRGKKDAATALFNLSIFHENKVRIVQAGA 360
            LFSLSVLEEYK KIGRS A++ALV+LL  GTLRGKKDAATALFNLSIFHENK RIVQAGA
Sbjct: 596  LFSLSVLEEYKAKIGRSGAIRALVELLGVGTLRGKKDAATALFNLSIFHENKARIVQAGA 655

Query: 361  VKHLIELMDPDTGMIDKCVALLANLSTIPEGRSAITREGGIPLLVEVLETGSQRGKENVA 540
            VK+L+EL+D  TGM+DK  ALLANLSTI EGR AI REGGIPLLVE++ETG+ RGKEN A
Sbjct: 656  VKYLVELLDTATGMVDKAAALLANLSTISEGRLAIAREGGIPLLVEIVETGTMRGKENAA 715

Query: 541  SILLQLCFNSQKFCTLVLQEGAVPPLVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 720
            SILLQLC +S KFC LVLQEGAVPPLVALSQ GTPRAKEKA Q+LSHFRNQR+G  GK K
Sbjct: 716  SILLQLCLHSNKFCILVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRNQRDGTTGKGK 775


>ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3-like isoform 2 [Vitis
            vinifera]
          Length = 757

 Score =  370 bits (949), Expect = e-100
 Identities = 196/240 (81%), Positives = 210/240 (87%)
 Frame = +1

Query: 1    LISLLYSVKKLTQEHAVTTLLNLSINENNKNMIAEAGAIEPLIHVLKSGNAGAKENGAAT 180
            L+ LLYS  K TQE+AVT LLNLSIN+ NK +IAEAGAIE LIHVLKSGNAGAKEN AAT
Sbjct: 517  LVLLLYSEVKQTQENAVTALLNLSINDANKVIIAEAGAIESLIHVLKSGNAGAKENSAAT 576

Query: 181  LFSLSVLEEYKIKIGRSAAVKALVDLLESGTLRGKKDAATALFNLSIFHENKVRIVQAGA 360
            LFSLSVLEEYK KIG S AVKALVDLL SGTLRGKKDAATALFNLSI HENK RI+QAGA
Sbjct: 577  LFSLSVLEEYKAKIGCSGAVKALVDLLGSGTLRGKKDAATALFNLSICHENKPRIIQAGA 636

Query: 361  VKHLIELMDPDTGMIDKCVALLANLSTIPEGRSAITREGGIPLLVEVLETGSQRGKENVA 540
            VK+L++LM+P TGM+DK VALLANLS I EGR AI REGGIPLLVE++ETGS RGKEN A
Sbjct: 637  VKYLVQLMEPATGMVDKAVALLANLSIISEGRFAIVREGGIPLLVELVETGSVRGKENAA 696

Query: 541  SILLQLCFNSQKFCTLVLQEGAVPPLVALSQCGTPRAKEKAHQILSHFRNQREGAVGKAK 720
            SILLQLC NS KFCTLVLQEGA+PPLVALSQ GTPRAKEKA Q+LSHFRNQREGA  K K
Sbjct: 697  SILLQLCINSPKFCTLVLQEGAIPPLVALSQSGTPRAKEKAQQLLSHFRNQREGAAAKGK 756


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