BLASTX nr result

ID: Coptis25_contig00024178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024178
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]   314   3e-83
emb|CBI22919.3| unnamed protein product [Vitis vinifera]              313   5e-83
ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|2...   224   4e-56
ref|XP_002278233.1| PREDICTED: uncharacterized protein LOC100264...   222   2e-55
ref|XP_002312344.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-54

>emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]
          Length = 955

 Score =  314 bits (805), Expect = 3e-83
 Identities = 177/368 (48%), Positives = 234/368 (63%), Gaps = 9/368 (2%)
 Frame = -1

Query: 1247 GHREHKELKGNQPLKSQQNSQKNIHRKPTTPSVSGVLRQNNQKQNCSTNRDKLPTKSVAS 1068
            G RE  E+K +QP KSQ N+QK +H+KP+TP+  GVLRQNNQKQNC  ++DKLP+KS  S
Sbjct: 368  GLREQNEVKSSQPFKSQSNTQKGVHKKPSTPNAPGVLRQNNQKQNCMVDKDKLPSKSFVS 427

Query: 1067 NQQGRKALSSEASFGHNKPSIKVVGNSKVGVRRSGLDTSDTEKVVASQSRTKNFPRKKRA 888
              Q RK LS E+S G +K S KV GNSK G R+ GL+ +D+EK V S S TKNFPRKKR+
Sbjct: 428  TSQSRKPLSGESSLGRHKTSSKVSGNSKAGSRKLGLEPTDSEKEV-SYSSTKNFPRKKRS 486

Query: 887  IEGNSYRERSGFGDALLVNEDNKPVQPNATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKP 708
            I G+   E +   D  L++++ K  Q N   E H  W +DSR+KGMDVVSFTFT+P+ + 
Sbjct: 487  INGDFNLENNWVADNFLIDKNEKAFQSNTVKERHFSWAEDSRKKGMDVVSFTFTAPLTRS 546

Query: 707  VTGSQVSVPVVEKHTNFGVGSKYSDEHIYPNENRSKVPSLGLNVIGGDALNKLLEQKLRE 528
            + GS+       K    G+ + Y  + +    +   + SLG+NVIGGDAL+ LL+QKLRE
Sbjct: 547  IPGSESPSQAAMKSN--GLSTDYRGKKVLLEPDAKNLSSLGINVIGGDALSMLLDQKLRE 604

Query: 527  LTYGIESSSRNLIEPMEVATSASFWPEFVSDLNAVSTTPKDCDNRAKLGVHRDSI--VYD 354
            LT G++SS R   +    A S+S   +    LNA+STT +  D R +  + +D +  +YD
Sbjct: 605  LTXGVDSSRRESFKVGSTA-SSSILQDLAPTLNALSTTHRLHDKRDQPWLQKDKMDSLYD 663

Query: 353  SNCFSTKA-------HRFQEAEEVDEHSIDSSSTVRKDSNCRQPSPVSILEPCFSNESCN 195
            S+ FS  A       H+ Q   E+DE S  S++  R   +CR PSPVSILEP FS ESCN
Sbjct: 664  SD-FSFTAPSAFDIKHKLQGENEMDECSSSSNAEARNLLDCRHPSPVSILEPSFSTESCN 722

Query: 194  SSDSADSN 171
            SSDS DSN
Sbjct: 723  SSDSTDSN 730


>emb|CBI22919.3| unnamed protein product [Vitis vinifera]
          Length = 848

 Score =  313 bits (803), Expect = 5e-83
 Identities = 177/368 (48%), Positives = 234/368 (63%), Gaps = 9/368 (2%)
 Frame = -1

Query: 1247 GHREHKELKGNQPLKSQQNSQKNIHRKPTTPSVSGVLRQNNQKQNCSTNRDKLPTKSVAS 1068
            G RE  E+K +QP KSQ N+QK +H+KP+TP+  GVLRQNNQKQNC  ++DKLP+KS  S
Sbjct: 322  GLREQNEVKSSQPFKSQSNTQKGVHKKPSTPNAPGVLRQNNQKQNCMVDKDKLPSKSFVS 381

Query: 1067 NQQGRKALSSEASFGHNKPSIKVVGNSKVGVRRSGLDTSDTEKVVASQSRTKNFPRKKRA 888
              Q RK LS E+S G +K S KV GNSK G R+ GL+ +D+EK V S S TKNFPRKKR+
Sbjct: 382  TSQSRKPLSGESSLGRHKTSSKVSGNSKAGSRKLGLEPTDSEKEV-SYSSTKNFPRKKRS 440

Query: 887  IEGNSYRERSGFGDALLVNEDNKPVQPNATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKP 708
            I G+   E +   D  L++++ K  Q N   E H  W +DSR+KGMDVVSFTFT+P+ + 
Sbjct: 441  INGDFNLENNWVADNFLIDKNEKAFQSNTVKERHFSWAEDSRKKGMDVVSFTFTAPLTRS 500

Query: 707  VTGSQVSVPVVEKHTNFGVGSKYSDEHIYPNENRSKVPSLGLNVIGGDALNKLLEQKLRE 528
            + GS+       K    G+ + Y  + +    +   + SLG+NVIGGDAL+ LL+QKLRE
Sbjct: 501  IPGSESPSQAAMKSN--GLSTDYRGKKVLLEPDAKNLSSLGINVIGGDALSMLLDQKLRE 558

Query: 527  LTYGIESSSRNLIEPMEVATSASFWPEFVSDLNAVSTTPKDCDNRAKLGVHRDSI--VYD 354
            LT G++SS R   +    A S+S   +    LNA+STT +  D R +  + +D +  +YD
Sbjct: 559  LTDGVDSSRRESFKVGSTA-SSSILQDLAPTLNALSTTHRLHDKRDQPWLQKDKMDSLYD 617

Query: 353  SNCFSTKA-------HRFQEAEEVDEHSIDSSSTVRKDSNCRQPSPVSILEPCFSNESCN 195
            S+ FS  A       H+ Q   E+DE S  S++  R   +CR PSPVSILEP FS ESCN
Sbjct: 618  SD-FSFTAPSAFDIKHKLQGENEMDECSSSSNAEARNLLDCRHPSPVSILEPSFSTESCN 676

Query: 194  SSDSADSN 171
            SSDS DSN
Sbjct: 677  SSDSTDSN 684


>ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|222863965|gb|EEF01096.1|
            predicted protein [Populus trichocarpa]
          Length = 933

 Score =  224 bits (571), Expect = 4e-56
 Identities = 145/364 (39%), Positives = 209/364 (57%), Gaps = 6/364 (1%)
 Frame = -1

Query: 1247 GHREHKELKGNQPLKSQQNSQKNIHRKPTTPSVSGVLRQNNQKQNCSTNRDKLPTKSVAS 1068
            G +E  E+  +QP KS  N QK+  ++      SG LRQNNQKQNC  ++DKLP+K + S
Sbjct: 367  GQKEQAEVSSSQPFKSHPNFQKSSQKRSPILKASGALRQNNQKQNCMMDKDKLPSKPLVS 426

Query: 1067 NQQGRKALSSEASFGHNKPSIKVVGNSKVGVRRSGLDTSDTEKVVASQSRTKNFPRKKRA 888
            N QG+K LS      H K   K  G SK G R+   D+ + EK  ++ S T++ PRKKR+
Sbjct: 427  NLQGKKVLSGNPPARH-KTFCKTFG-SKNGSRKLASDSREVEKGTSNYS-TRSNPRKKRS 483

Query: 887  IEGNSYRERSGFGDALLVNEDNKPVQPNATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKP 708
            I+GN + E++   D LL++ + K V+ N  I+ H  W+++S+RKGMDVVSFTFT+P+ + 
Sbjct: 484  IDGNLHLEKNQVADKLLIDRNRKAVETNPVIDRHFSWVEESKRKGMDVVSFTFTAPLTRS 543

Query: 707  VTGSQVSVPVVEKHTNFGVGSKYSDEHIYPNENRSKVPSLGLNVIGGDALNKLLEQKLRE 528
            + GS+    VV++ +  G  +    + +  + +   + S G NVIGGDAL+ LLEQK+RE
Sbjct: 544  MPGSETPTRVVQEKS--GSCTDNRSKRLLLDTDSMNLSSGGYNVIGGDALSTLLEQKMRE 601

Query: 527  LTYGIESSSRNLIEPMEVATSASFWPEFVSDLNAVSTTPKDCDNR--AKLGVHRDSIVYD 354
            LT  +ESSS                   +S  ++  T P+  DN+  +   + R    YD
Sbjct: 602  LTKTVESSSS------------------LSTFSSGGTAPRLHDNKDESVSCIDRSDSCYD 643

Query: 353  SNCFST--KAHRFQE-AEEVDEHSIDS-SSTVRKDSNCRQPSPVSILEPCFSNESCNSSD 186
             +  ST   A R +   + VDE    S S+  RK  +CR+PSPVS+LE  FS ES +S D
Sbjct: 644  CHFLSTDPAALRLKRILQGVDEMDCSSKSNDSRKFLDCRRPSPVSVLEHSFSTESSSSLD 703

Query: 185  SADS 174
            SADS
Sbjct: 704  SADS 707


>ref|XP_002278233.1| PREDICTED: uncharacterized protein LOC100264914 [Vitis vinifera]
          Length = 919

 Score =  222 bits (565), Expect = 2e-55
 Identities = 143/365 (39%), Positives = 200/365 (54%), Gaps = 9/365 (2%)
 Frame = -1

Query: 1241 REHKELKGNQPLKSQQNSQKNIHRKPTTPSVSGVLRQNNQKQNCSTNRDKLPTKSVASNQ 1062
            +EH E+K  Q  KSQ + QKN+ ++ +T   S  L+QNNQKQN  + RD L +K+  SNQ
Sbjct: 331  KEHTEVKSGQSSKSQPSMQKNMLKRTSTNRTSNALKQNNQKQNGGSTRDVLTSKTAVSNQ 390

Query: 1061 QGRKALSSEASFGHNKPSIKVVGNSKVGVRRSGLDTSDTEKVVASQSRTKNFPRKKRAIE 882
            + +KA S   SFG +K   KVV N++ G ++ G   +D  K  +S S+TKN  RKK +++
Sbjct: 391  KSKKAPSVNGSFGPSKTVNKVVINTEAGSKKMGSVANDIRK-ESSLSKTKNASRKKLSVD 449

Query: 881  GNSYRERSGFGDALLVNEDNKPVQPNATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKPVT 702
            GN   E S   D +L N+D K ++ N  +EG + W  D+ +KGMDVVSFTFTSPMKKP+ 
Sbjct: 450  GNICFEGS-IADGVLTNKDVKSIKCNVAVEGGTDWGGDNIKKGMDVVSFTFTSPMKKPIP 508

Query: 701  GSQVSVPVVEKHTNFGVGSKYSDEHIYPNENRSKVPSLGLNVIGGDALNKLLEQKLRELT 522
            GS  S  V+E    F + S  +DE+       S + SLG NVIG D+L  LLEQKLRELT
Sbjct: 509  GSMSSDQVMEAKYQFNIDS--NDENDAHGSKNSSISSLGPNVIGADSLGVLLEQKLRELT 566

Query: 521  YGIESSSRNLIEPMEVATSASFWPEFVSDLNAVSTTPKDCDNRAKLGVHRDSIVYDSNCF 342
            + + SS  +L  P   A+S S   +    +N V+ T     +R    +H D         
Sbjct: 567  FRVGSSHSDLFAPGTAASSTSRLQDSDLRVNVVAPTSTKHTSRLLPDLHEDKSDGPHYFD 626

Query: 341  STKAHRFQEAEEVDEHSIDSSSTVRKDSNCRQ---------PSPVSILEPCFSNESCNSS 189
             +     Q  ++   H  +    +  +SN  +         PSPV  LE  FSN +CNS 
Sbjct: 627  FSSVGGLQANQKWQVHVSEGMEELSGNSNNNEMGNGLSGQHPSPVLSLESSFSNITCNSP 686

Query: 188  DSADS 174
            DS +S
Sbjct: 687  DSRNS 691


>ref|XP_002312344.1| predicted protein [Populus trichocarpa] gi|222852164|gb|EEE89711.1|
            predicted protein [Populus trichocarpa]
          Length = 934

 Score =  219 bits (557), Expect = 2e-54
 Identities = 144/368 (39%), Positives = 207/368 (56%), Gaps = 10/368 (2%)
 Frame = -1

Query: 1247 GHREHKELKGNQPLKSQQNSQKNIHRKPTTPSVSGVLRQNNQKQNCSTNRDKLPTKSVAS 1068
            G +E +E+  +Q  K Q N QK++ ++    + SGVLRQNNQKQNC  ++DKLP+K + S
Sbjct: 366  GQKELREVSSSQSFKCQPNVQKSLQKRSPVQNTSGVLRQNNQKQNCIMDKDKLPSKPLVS 425

Query: 1067 NQQGRKALSSEASFGHNKPSIKVVGNSKVGVRRSGLDTSDTEKVVASQSRTKNFPRKKRA 888
              QG++ LS      H K S K  G SK G R+  LD  + EK  ++ S   N PRKKR+
Sbjct: 426  KLQGKRVLSGNPPVRH-KTSGKPFG-SKNGSRKLDLDLREGEKGNSNYSMANN-PRKKRS 482

Query: 887  IEGNSYRERSGFGDALLVNEDNKPVQPNATIEGHSRWMDDSRRKGMDVVSFTFTSPMKKP 708
            I+GN + E++   D  L++ + K V+P   I+    W ++S+RKGMDVVSFTFT+P+ + 
Sbjct: 483  IDGNLHVEKNQVVDNKLIDRNRKAVEPTPVIDRPFSWAEESKRKGMDVVSFTFTAPLTRS 542

Query: 707  VTGSQVSVPVVEKHTNFGVGSKYSDEHIYPNENRSKVPSLGLNVIGGDALNKLLEQKLRE 528
            + GS+     V+K  N G       + +  + +  K+ S+G NVIGGDAL+ LLEQKLRE
Sbjct: 543  MPGSETPTQAVQK--NSGSCMDNCSKRLLLDTDSMKLSSVGYNVIGGDALSSLLEQKLRE 600

Query: 527  LTYGIESSSRNLIEPMEVATSASFWPEFVSDLNAVSTTPKDCDNRAK--LGVHRDSIVYD 354
            LT G+ESSS                   +S  ++    P+  DN+ +    + +    YD
Sbjct: 601  LTKGVESSSS------------------ISTFSSGGAAPRLHDNKDQSFSCIDKSDSCYD 642

Query: 353  SNC---FSTKA-----HRFQEAEEVDEHSIDSSSTVRKDSNCRQPSPVSILEPCFSNESC 198
            S     F+  A     H FQ  +E+D  S   S+  R+  +CR+PSPVS+LE  FS ES 
Sbjct: 643  SPSALFFTDPAALRLKHTFQGVDEMDCSS--KSNDSRQLLDCRRPSPVSVLEHSFSTESS 700

Query: 197  NSSDSADS 174
            +S DS DS
Sbjct: 701  SSLDSMDS 708


Top