BLASTX nr result

ID: Coptis25_contig00024168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024168
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166740.1| PREDICTED: probable LRR receptor-like serine...    72   4e-11
ref|XP_004148196.1| PREDICTED: probable LRR receptor-like serine...    72   4e-11
ref|XP_002312176.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002278392.1| PREDICTED: probable LRR receptor-like serine...    72   6e-11
emb|CBI25442.3| unnamed protein product [Vitis vinifera]               70   2e-10

>ref|XP_004166740.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase MRH1-like, partial [Cucumis sativus]
          Length = 608

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +2

Query: 53  YTILVLFLFFWNLDLSWSLNSEGVSLLRFRDKVVKDPYGALLNWNRNDGEENPCSWF 223
           Y  +V+ L F +  LSWSLN EG++LL+FR++VV DP+G L NWN +  + NPC WF
Sbjct: 19  YGFVVISLLFQSFHLSWSLNEEGLTLLKFRERVVNDPFGVLSNWNDHKEDINPCFWF 75


>ref|XP_004148196.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase MRH1-like [Cucumis sativus]
          Length = 680

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +2

Query: 53  YTILVLFLFFWNLDLSWSLNSEGVSLLRFRDKVVKDPYGALLNWNRNDGEENPCSWF 223
           Y  +V+ L F +  LSWSLN EG++LL+FR++VV DP+G L NWN +  + NPC WF
Sbjct: 19  YGFVVISLLFQSFHLSWSLNEEGLTLLKFRERVVNDPFGVLSNWNDHKEDINPCFWF 75


>ref|XP_002312176.1| predicted protein [Populus trichocarpa] gi|222851996|gb|EEE89543.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +2

Query: 41  KKRRYTILVLFLFFWNLDLSWSLNSEGVSLLRFRDKVVKDPYGALLNWNRNDGEENPCSW 220
           K  R+ +L+LFL + NL L +SLN EG++LL+ R+ +V DPYGAL +W  + G  NPCSW
Sbjct: 7   KISRFGVLILFLVYQNLILCFSLNDEGMALLKLREGIVSDPYGALKSWKMDFGVINPCSW 66

Query: 221 F 223
           F
Sbjct: 67  F 67


>ref|XP_002278392.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At5g45840-like [Vitis vinifera]
          Length = 720

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/65 (49%), Positives = 45/65 (69%)
 Frame = +2

Query: 29  NTMDKKRRYTILVLFLFFWNLDLSWSLNSEGVSLLRFRDKVVKDPYGALLNWNRNDGEEN 208
           N    +   T++V+ L   +L L W LNSEG++LL+FR+ VVKDP+GAL +WN + GE +
Sbjct: 8   NRFKLRAAMTMVVISLLHQHLRLCWCLNSEGLALLKFRESVVKDPFGALSDWNDSGGEVD 67

Query: 209 PCSWF 223
            CSWF
Sbjct: 68  HCSWF 72


>emb|CBI25442.3| unnamed protein product [Vitis vinifera]
          Length = 670

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/55 (54%), Positives = 42/55 (76%)
 Frame = +2

Query: 59  ILVLFLFFWNLDLSWSLNSEGVSLLRFRDKVVKDPYGALLNWNRNDGEENPCSWF 223
           ++++   + NL L WSLN EG++LLRFR++VV DP+ AL NW  +DGE +PCSWF
Sbjct: 76  VVIMCSLYQNLGLCWSLNDEGLALLRFRERVVSDPFRALANW--DDGELDPCSWF 128


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