BLASTX nr result

ID: Coptis25_contig00024167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024167
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33333.3| unnamed protein product [Vitis vinifera]              350   3e-94
ref|XP_002282961.1| PREDICTED: uncharacterized protein LOC100258...   347   2e-93
ref|XP_002285613.1| PREDICTED: uncharacterized protein LOC100261...   345   1e-92
ref|XP_002303806.1| predicted protein [Populus trichocarpa] gi|2...   339   6e-91
ref|XP_004134021.1| PREDICTED: uncharacterized protein LOC101219...   330   5e-88

>emb|CBI33333.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  350 bits (898), Expect = 3e-94
 Identities = 176/222 (79%), Positives = 193/222 (86%), Gaps = 4/222 (1%)
 Frame = -3

Query: 858 EPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIPT 679
           E V+ELY+HDILGGS+PTARP+TGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGA+PT
Sbjct: 35  EHVIELYMHDILGGSSPTARPVTGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGALPT 94

Query: 678 VNANGVPXXXXXXXXXXXGNSNAQ----TVNGRHTGTQLGPDGLGLGFGTITVIDDMLTS 511
           VN NG+P           GN N +      NG+ T TQLGPDGLGLGFGTITVIDD+LTS
Sbjct: 95  VNTNGIPLGTGLAGTNFVGNPNRKPNDPNQNGK-TATQLGPDGLGLGFGTITVIDDVLTS 153

Query: 510 GPDLGSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSV 331
           GP+LGSQSIGKAQGVYVASSADGTTQMMAF+AM+EGGEYGD+LNF+GVYKIGS +SRLSV
Sbjct: 154 GPELGSQSIGKAQGVYVASSADGTTQMMAFTAMMEGGEYGDNLNFFGVYKIGSAMSRLSV 213

Query: 330 TGGTGKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLTY 205
           TGGTGKFKNA GF EVRPL+  GQHVTDGAE LLRITVHL+Y
Sbjct: 214 TGGTGKFKNARGFGEVRPLIPSGQHVTDGAETLLRITVHLSY 255


>ref|XP_002282961.1| PREDICTED: uncharacterized protein LOC100258026 [Vitis vinifera]
          Length = 249

 Score =  347 bits (891), Expect = 2e-93
 Identities = 173/218 (79%), Positives = 188/218 (86%)
 Frame = -3

Query: 858 EPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIPT 679
           E V+ELY+HDILGGS+PTARP+TGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGA+PT
Sbjct: 35  EHVIELYMHDILGGSSPTARPVTGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGALPT 94

Query: 678 VNANGVPXXXXXXXXXXXGNSNAQTVNGRHTGTQLGPDGLGLGFGTITVIDDMLTSGPDL 499
           VN NG+P           GN N    NGR   TQLGPDGLGLGFGTITVIDD+LTSGPDL
Sbjct: 95  VNTNGIPLGTGLAGTNFVGNPNRN--NGR-PATQLGPDGLGLGFGTITVIDDVLTSGPDL 151

Query: 498 GSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSVTGGT 319
           GSQ +GKAQGVYVASS DGTTQMM F+AMIEGGEYGDS+NF+GVYKIGST+SRLSVTGGT
Sbjct: 152 GSQQMGKAQGVYVASSVDGTTQMMTFTAMIEGGEYGDSINFFGVYKIGSTMSRLSVTGGT 211

Query: 318 GKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLTY 205
           GKFKNA GFAE+RPL+  GQHVTDG E LLRIT HL+Y
Sbjct: 212 GKFKNACGFAEIRPLIPSGQHVTDGVETLLRITAHLSY 249


>ref|XP_002285613.1| PREDICTED: uncharacterized protein LOC100261265 [Vitis vinifera]
          Length = 253

 Score =  345 bits (884), Expect = 1e-92
 Identities = 175/220 (79%), Positives = 189/220 (85%), Gaps = 1/220 (0%)
 Frame = -3

Query: 861 DEPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIP 682
           + PVLELY+HDILGG+NPTARPITGLLGNIYSGQVPFARPVGF PPK GVAIPNANGAIP
Sbjct: 35  EAPVLELYMHDILGGNNPTARPITGLLGNIYSGQVPFARPVGFNPPKDGVAIPNANGAIP 94

Query: 681 TVNAN-GVPXXXXXXXXXXXGNSNAQTVNGRHTGTQLGPDGLGLGFGTITVIDDMLTSGP 505
            VN N G+P           G  N    NG+ T TQLGPDGLGLGFGTITVIDD+LTSGP
Sbjct: 95  LVNGNNGIPLGTGLAGSAFGGKPNDPNQNGK-TATQLGPDGLGLGFGTITVIDDVLTSGP 153

Query: 504 DLGSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSVTG 325
           +LGSQSIGKAQGVYVASSADGTTQMMAF+AM+EGGEYGD+LNF+GVYKIGS +SRLSVTG
Sbjct: 154 ELGSQSIGKAQGVYVASSADGTTQMMAFTAMMEGGEYGDNLNFFGVYKIGSAMSRLSVTG 213

Query: 324 GTGKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLTY 205
           GTGKFKNA GF EVRPL+  GQHVTDGAE LLRITVHL+Y
Sbjct: 214 GTGKFKNARGFGEVRPLIPSGQHVTDGAETLLRITVHLSY 253


>ref|XP_002303806.1| predicted protein [Populus trichocarpa] gi|222841238|gb|EEE78785.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  339 bits (870), Expect = 6e-91
 Identities = 171/219 (78%), Positives = 187/219 (85%), Gaps = 1/219 (0%)
 Frame = -3

Query: 858 EPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIPT 679
           EPVLELY+HDILGGSNPTARPITGLLGNIYSGQVPFARPVGF+PPKG VAIPNANGA+PT
Sbjct: 35  EPVLELYMHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFVPPKGAVAIPNANGALPT 94

Query: 678 VNA-NGVPXXXXXXXXXXXGNSNAQTVNGRHTGTQLGPDGLGLGFGTITVIDDMLTSGPD 502
           VN  NG+P           GN N Q  NG+   TQLGPDGLGLGFGTITVIDD LT+ P+
Sbjct: 95  VNGLNGIPLGTGLAGTTFAGNPNGQNTNGQ-IQTQLGPDGLGLGFGTITVIDDTLTNSPE 153

Query: 501 LGSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSVTGG 322
           LGSQ +GKAQGVYVASSADG+TQMMAF+AM EGGE+GDSLNFYG+Y+IGS +SRLSVTGG
Sbjct: 154 LGSQQLGKAQGVYVASSADGSTQMMAFTAMFEGGEFGDSLNFYGIYRIGSAMSRLSVTGG 213

Query: 321 TGKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLTY 205
           TGKFKNA GFAEVR L+ PGQ VTDGAE LLRI+VHL Y
Sbjct: 214 TGKFKNAIGFAEVRGLIPPGQAVTDGAETLLRISVHLKY 252


>ref|XP_004134021.1| PREDICTED: uncharacterized protein LOC101219771 [Cucumis sativus]
           gi|449487506|ref|XP_004157660.1| PREDICTED:
           uncharacterized LOC101219771 [Cucumis sativus]
          Length = 249

 Score =  330 bits (845), Expect = 5e-88
 Identities = 166/219 (75%), Positives = 183/219 (83%), Gaps = 1/219 (0%)
 Frame = -3

Query: 858 EPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIPT 679
           EPVLE Y+HDILGG++PTARPITGLLGNIY+GQVPFA P+GFLPP GGVAIPNANGA+PT
Sbjct: 35  EPVLEFYMHDILGGASPTARPITGLLGNIYTGQVPFATPIGFLPPDGGVAIPNANGALPT 94

Query: 678 VNA-NGVPXXXXXXXXXXXGNSNAQTVNGRHTGTQLGPDGLGLGFGTITVIDDMLTSGPD 502
           VN  NG+P           GN N Q V      TQLGPDGLGLGFGTITVIDD+LT+ P+
Sbjct: 95  VNGINGIPLGTGLSGTSFAGNPNPQNV----PQTQLGPDGLGLGFGTITVIDDVLTTSPE 150

Query: 501 LGSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSVTGG 322
           LGSQSIG+AQGVYVASSADGTTQMMAF+AM+EGGEYGDSLNFYGV++IGS  S LSVTGG
Sbjct: 151 LGSQSIGQAQGVYVASSADGTTQMMAFTAMVEGGEYGDSLNFYGVFRIGSPSSHLSVTGG 210

Query: 321 TGKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLTY 205
           TGKFKNA G AEVR L+ PGQHV DGAE LLR+ VHLTY
Sbjct: 211 TGKFKNARGIAEVRSLIPPGQHVADGAETLLRVLVHLTY 249


Top