BLASTX nr result

ID: Coptis25_contig00024165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024165
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306007.1| predicted protein [Populus trichocarpa] gi|1...   235   8e-60
ref|XP_002271479.1| PREDICTED: acyl-coenzyme A thioesterase 13 [...   233   2e-59
ref|XP_002518008.1| acyl-CoA thioesterase, putative [Ricinus com...   233   3e-59
emb|CAN70724.1| hypothetical protein VITISV_011379 [Vitis vinifera]   215   9e-54
ref|XP_002271369.1| PREDICTED: acyl-coenzyme A thioesterase 13 [...   214   1e-53

>ref|XP_002306007.1| predicted protein [Populus trichocarpa] gi|118484695|gb|ABK94218.1|
           unknown [Populus trichocarpa]
           gi|222848971|gb|EEE86518.1| predicted protein [Populus
           trichocarpa]
          Length = 156

 Score =  235 bits (599), Expect = 8e-60
 Identities = 117/156 (75%), Positives = 137/156 (87%)
 Frame = -1

Query: 670 MDFDAVKRFLEGKQEGEDKSSALINGLPPKFFDPFIMQGVQVDVMEPGRVVCSMKVPPRL 491
           MD ++VKR+LE     EDK+++ I  +P +FF+ FIMQG+ +D++EPGRVVCSMKVPPRL
Sbjct: 1   MDLESVKRYLETGGYEEDKNASTIEKMPLRFFERFIMQGLHIDLIEPGRVVCSMKVPPRL 60

Query: 490 LNTGNFLHGGATASLVDLIGSAAIYTVGAPNSGVSIEINVSYLDAAFRDEEIEIEAKVLR 311
           LN GNFLHGGATA+LVDL+GSAAI+TVGAP +GVS+EINVSYLDAAF DEEIEIEA+VLR
Sbjct: 61  LNGGNFLHGGATATLVDLVGSAAIFTVGAPATGVSVEINVSYLDAAFADEEIEIEARVLR 120

Query: 310 VGKTVGVVSVELRKKKTGKIFAQGRHTKYLAASSKL 203
           VGK VGVVSVEL+KKKTGKI AQGRHTKYLA  SKL
Sbjct: 121 VGKAVGVVSVELKKKKTGKIIAQGRHTKYLAVPSKL 156


>ref|XP_002271479.1| PREDICTED: acyl-coenzyme A thioesterase 13 [Vitis vinifera]
           gi|296084814|emb|CBI27696.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score =  233 bits (595), Expect = 2e-59
 Identities = 116/156 (74%), Positives = 135/156 (86%)
 Frame = -1

Query: 670 MDFDAVKRFLEGKQEGEDKSSALINGLPPKFFDPFIMQGVQVDVMEPGRVVCSMKVPPRL 491
           MD ++VKR LE  Q  E++SS  IN LP + FDPFI+QG+ VD++EPGR++CSMKVPPRL
Sbjct: 1   MDLESVKRLLENGQGTENESS--INSLPTRLFDPFILQGLHVDLVEPGRLICSMKVPPRL 58

Query: 490 LNTGNFLHGGATASLVDLIGSAAIYTVGAPNSGVSIEINVSYLDAAFRDEEIEIEAKVLR 311
           LN GNFLHGGA ASLVDL+GSAAI++ GAPNSGVS+EINVSYLDAA+ DEEIEIE KVLR
Sbjct: 59  LNNGNFLHGGAMASLVDLVGSAAIFSTGAPNSGVSVEINVSYLDAAYADEEIEIECKVLR 118

Query: 310 VGKTVGVVSVELRKKKTGKIFAQGRHTKYLAASSKL 203
           VGK+VGVVSVE+RKKKTGKI AQGRHTKYL   SK+
Sbjct: 119 VGKSVGVVSVEIRKKKTGKIIAQGRHTKYLLVRSKI 154


>ref|XP_002518008.1| acyl-CoA thioesterase, putative [Ricinus communis]
           gi|223542990|gb|EEF44526.1| acyl-CoA thioesterase,
           putative [Ricinus communis]
          Length = 190

 Score =  233 bits (594), Expect = 3e-59
 Identities = 117/160 (73%), Positives = 140/160 (87%)
 Frame = -1

Query: 682 EEKKMDFDAVKRFLEGKQEGEDKSSALINGLPPKFFDPFIMQGVQVDVMEPGRVVCSMKV 503
           EE++M+ + VKR+LE   E +DK+ + I G+P +FF+ FIMQG+ VD++E GR+VCSMKV
Sbjct: 32  EEEEMELEKVKRYLEKGGE-DDKNGSTIEGMPLRFFERFIMQGIHVDLIEYGRLVCSMKV 90

Query: 502 PPRLLNTGNFLHGGATASLVDLIGSAAIYTVGAPNSGVSIEINVSYLDAAFRDEEIEIEA 323
           PPRLLN+GNFLHGGATA+LVDL+GSA IYTVGAP +GVS+EINVSYLDAA+ DEEIEIE 
Sbjct: 91  PPRLLNSGNFLHGGATATLVDLVGSAVIYTVGAPFTGVSVEINVSYLDAAYPDEEIEIEG 150

Query: 322 KVLRVGKTVGVVSVELRKKKTGKIFAQGRHTKYLAASSKL 203
           KVLRVGK VGVVSVELRKKKTGKI AQGRHTKYLA +SK+
Sbjct: 151 KVLRVGKAVGVVSVELRKKKTGKIIAQGRHTKYLAFTSKM 190


>emb|CAN70724.1| hypothetical protein VITISV_011379 [Vitis vinifera]
          Length = 154

 Score =  215 bits (547), Expect = 9e-54
 Identities = 110/156 (70%), Positives = 135/156 (86%)
 Frame = -1

Query: 670 MDFDAVKRFLEGKQEGEDKSSALINGLPPKFFDPFIMQGVQVDVMEPGRVVCSMKVPPRL 491
           MD  +VKR LE K+EG + S++LIN +P + FDPFI+ G+ +D++E GR++CSMKVPPRL
Sbjct: 1   MDLGSVKRXLE-KKEGTE-SASLINSMPSQVFDPFILHGLHIDLVERGRLICSMKVPPRL 58

Query: 490 LNTGNFLHGGATASLVDLIGSAAIYTVGAPNSGVSIEINVSYLDAAFRDEEIEIEAKVLR 311
           LNT   LHGGATASLVDL+G+AAI TVG+P +GVS+EI+VS+LDAAF DEEIEIEAKVLR
Sbjct: 59  LNTAKTLHGGATASLVDLVGAAAIATVGSPLTGVSVEISVSFLDAAFVDEEIEIEAKVLR 118

Query: 310 VGKTVGVVSVELRKKKTGKIFAQGRHTKYLAASSKL 203
           VGK+VGVVSVE+RKKKTGKI AQGRHTK+LA  SK+
Sbjct: 119 VGKSVGVVSVEIRKKKTGKIVAQGRHTKFLAVPSKM 154


>ref|XP_002271369.1| PREDICTED: acyl-coenzyme A thioesterase 13 [Vitis vinifera]
           gi|296084815|emb|CBI27697.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score =  214 bits (545), Expect = 1e-53
 Identities = 110/156 (70%), Positives = 135/156 (86%)
 Frame = -1

Query: 670 MDFDAVKRFLEGKQEGEDKSSALINGLPPKFFDPFIMQGVQVDVMEPGRVVCSMKVPPRL 491
           MD  +VKR LE K+EG + S++LIN +P + FDPFI+ G+ +D++E GR++CSMKVPPRL
Sbjct: 1   MDLGSVKRNLE-KKEGTE-SASLINSMPSQVFDPFILHGLHIDLVERGRLICSMKVPPRL 58

Query: 490 LNTGNFLHGGATASLVDLIGSAAIYTVGAPNSGVSIEINVSYLDAAFRDEEIEIEAKVLR 311
           LNT   LHGGATASLVDL+G+AAI TVG+P +GVS+EI+VS+LDAAF DEEIEIEAKVLR
Sbjct: 59  LNTAKTLHGGATASLVDLVGAAAIATVGSPLTGVSVEISVSFLDAAFVDEEIEIEAKVLR 118

Query: 310 VGKTVGVVSVELRKKKTGKIFAQGRHTKYLAASSKL 203
           VGK+VGVVSVE+RKKKTGKI AQGRHTK+LA  SK+
Sbjct: 119 VGKSVGVVSVEIRKKKTGKIVAQGRHTKFLAVPSKM 154


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