BLASTX nr result
ID: Coptis25_contig00024159
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024159 (576 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containi... 271 6e-71 emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera] 270 2e-70 gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indi... 251 6e-65 ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group] g... 251 6e-65 ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [S... 234 8e-60 >ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Vitis vinifera] Length = 618 Score = 271 bits (693), Expect = 6e-71 Identities = 131/190 (68%), Positives = 160/190 (84%) Frame = +2 Query: 5 RDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCGF 184 RD V+WNSMI GLA+NGFA +AI L+ MK EVKPN+ITFVGL+TACTHAG +ELG F Sbjct: 393 RDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEF 452 Query: 185 FKSMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIHL 364 F+SM +D+NI P +EH ACIV L+C+SGRL +AY FI +ME+EPNVVIWGTLLSA RIHL Sbjct: 453 FRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHL 512 Query: 365 NVELAEHSVQKLLVLEPENSGNYVLLSNIYSSVGRCEDALNMRNLMRDKGLQKTAAYSWI 544 NVELAE + +KLL LEP+NSGNYV+LSNIY+S GR ++AL +R LM+DK +QK AAYSW+ Sbjct: 513 NVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWV 572 Query: 545 ELDDLVHKFL 574 E++D VHKFL Sbjct: 573 EVEDRVHKFL 582 Score = 80.5 bits (197), Expect = 2e-13 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 2/169 (1%) Frame = +2 Query: 5 RDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCGF 184 RDVV+W++MI G A NG + EA++LF MK +++KPND+T V +L+AC G +E G Sbjct: 292 RDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG-ER 350 Query: 185 FKSMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIHL 364 S ++ V + ++ +Y K G + +A K+ NV W +++ I+ Sbjct: 351 IGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVT-WNSMIMGLAING 409 Query: 365 NVE--LAEHSVQKLLVLEPENSGNYVLLSNIYSSVGRCEDALNMRNLMR 505 E +A ++ K + ++P N +V L + G E L MR Sbjct: 410 FAEDAIALYNRMKEIEVKPNNI-TFVGLMTACTHAGHVELGLEFFRSMR 457 >emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera] Length = 396 Score = 270 bits (689), Expect = 2e-70 Identities = 131/190 (68%), Positives = 159/190 (83%) Frame = +2 Query: 5 RDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCGF 184 RD V+WNSMI GLA+NGFA +AI L+ MK EVKPN+ITFVGLLTACTHAG +ELG F Sbjct: 171 RDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEF 230 Query: 185 FKSMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIHL 364 F+SM +D+NI P +EH ACIV L+C+SGRL +AY FI +ME+EPNVVIWGTLLSA RIHL Sbjct: 231 FRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHL 290 Query: 365 NVELAEHSVQKLLVLEPENSGNYVLLSNIYSSVGRCEDALNMRNLMRDKGLQKTAAYSWI 544 NVELAE + +KLL LEP+NSGNYV+LSNIY+S R ++AL +R LM+DK +QK AAYSW+ Sbjct: 291 NVELAELAGKKLLELEPDNSGNYVILSNIYASASRWQEALKVRKLMKDKRVQKAAAYSWV 350 Query: 545 ELDDLVHKFL 574 E++D VHKFL Sbjct: 351 EVEDRVHKFL 360 Score = 79.0 bits (193), Expect = 5e-13 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 2/169 (1%) Frame = +2 Query: 5 RDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCGF 184 RDVV W++MI G A NG + EA++LF MK +++KPND+T V +L+AC G +E G Sbjct: 70 RDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETG-ER 128 Query: 185 FKSMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIHL 364 S ++ V + ++ +Y K G + +A K+ NV W +++ I+ Sbjct: 129 IGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVT-WNSMIMGLAING 187 Query: 365 NVE--LAEHSVQKLLVLEPENSGNYVLLSNIYSSVGRCEDALNMRNLMR 505 E +A ++ K + ++P N +V L + G E L MR Sbjct: 188 FAEDAIALYNRMKEIEVKPNNI-TFVGLLTACTHAGHVELGLEFFRSMR 235 >gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group] Length = 608 Score = 251 bits (641), Expect = 6e-65 Identities = 121/191 (63%), Positives = 149/191 (78%) Frame = +2 Query: 2 HRDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCG 181 H+ V++WNSM+ GLA+NGFA++AI L+ EM +V+PN+ITFV LLTACTHAGL++ G Sbjct: 380 HKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMS 439 Query: 182 FFKSMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIH 361 FFK M T +++ P+VEHCACIV L CKSGRL+EAY FI ME+EPN VIW TLLSACR H Sbjct: 440 FFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAH 499 Query: 362 LNVELAEHSVQKLLVLEPENSGNYVLLSNIYSSVGRCEDALNMRNLMRDKGLQKTAAYSW 541 +VELA+ + KLLVLEP+NS YVLLSNIY+ G D +R+LMR K +QK +AYSW Sbjct: 500 ADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSW 559 Query: 542 IELDDLVHKFL 574 IELD VHKFL Sbjct: 560 IELDGEVHKFL 570 Score = 72.8 bits (177), Expect = 4e-11 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 8/138 (5%) Frame = +2 Query: 5 RDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCGF 184 RDVV+W++MI G A NG E+++LF MK + KPN++T VG+L+AC G ELG G Sbjct: 280 RDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELG-GQ 338 Query: 185 FKSMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIH- 361 S N+ + ++ +Y K G + A +ME V+ W +++ ++ Sbjct: 339 IGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRME-HKVVITWNSMMRGLALNG 397 Query: 362 -------LNVELAEHSVQ 394 L E+ E VQ Sbjct: 398 FAQDAITLYKEMTEEDVQ 415 >ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group] gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa Japonica Group] gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group] gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group] Length = 608 Score = 251 bits (641), Expect = 6e-65 Identities = 121/191 (63%), Positives = 149/191 (78%) Frame = +2 Query: 2 HRDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCG 181 H+ V++WNSM+ GLA+NGFA++AI L+ EM +V+PN+ITFV LLTACTHAGL++ G Sbjct: 380 HKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMS 439 Query: 182 FFKSMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIH 361 FFK M T +++ P+VEHCACIV L CKSGRL+EAY FI ME+EPN VIW TLLSACR H Sbjct: 440 FFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAH 499 Query: 362 LNVELAEHSVQKLLVLEPENSGNYVLLSNIYSSVGRCEDALNMRNLMRDKGLQKTAAYSW 541 +VELA+ + KLLVLEP+NS YVLLSNIY+ G D +R+LMR K +QK +AYSW Sbjct: 500 ADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSW 559 Query: 542 IELDDLVHKFL 574 IELD VHKFL Sbjct: 560 IELDGEVHKFL 570 Score = 72.8 bits (177), Expect = 4e-11 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 8/138 (5%) Frame = +2 Query: 5 RDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCGF 184 RDVV+W++MI G A NG E+++LF MK + KPN++T VG+L+AC G ELG G Sbjct: 280 RDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELG-GQ 338 Query: 185 FKSMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIH- 361 S N+ + ++ +Y K G + A +ME V+ W +++ ++ Sbjct: 339 IGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRME-HKVVITWNSMMRGLALNG 397 Query: 362 -------LNVELAEHSVQ 394 L E+ E VQ Sbjct: 398 FAQDAITLYKEMTEEDVQ 415 >ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor] gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor] Length = 695 Score = 234 bits (597), Expect = 8e-60 Identities = 115/188 (61%), Positives = 140/188 (74%) Frame = +2 Query: 11 VVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELGCGFFK 190 VV+WNSMI GLA+NGFA +AI L+ +M ++PN++TFV LLTACTHAGL++ G FF+ Sbjct: 472 VVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFE 531 Query: 191 SMTTDYNIVPKVEHCACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLLSACRIHLNV 370 M ++ P+VEHCACIV L CKSGRL EAY FI ME+EPN VIW TLLSACR H +V Sbjct: 532 EMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADV 591 Query: 371 ELAEHSVQKLLVLEPENSGNYVLLSNIYSSVGRCEDALNMRNLMRDKGLQKTAAYSWIEL 550 ELA+ + KL+ LEP NS YVLLSNIY+ G D +R+LMR K LQK +AYSWIEL Sbjct: 592 ELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIEL 651 Query: 551 DDLVHKFL 574 D VH+FL Sbjct: 652 DGEVHRFL 659 Score = 70.1 bits (170), Expect = 2e-10 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 4/117 (3%) Frame = +2 Query: 5 RDVVSWNSMIGGLAVNGFAREAIDLFMEMKVSEVKPNDITFVGLLTACTHAGLIELG--- 175 RDVV+W++MI G + NG E+++LF MK + KPN++T VG+L+AC G ELG Sbjct: 369 RDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQI 428 Query: 176 CGFFKSMTTDYNIVPKVEHC-ACIVALYCKSGRLKEAYWFITKMEIEPNVVIWGTLL 343 + +S T +P + + ++ +Y K G + A +ME + VV W +++ Sbjct: 429 GNYIESQT-----LPLTSYLGSALIDMYTKCGHVARARSVFNRME-QKVVVTWNSMI 479