BLASTX nr result

ID: Coptis25_contig00024156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024156
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616250.1| Zinc finger protein [Medicago truncatula] gi...    57   2e-06
ref|XP_002262930.1| PREDICTED: zinc finger protein 830-like [Vit...    57   2e-06
ref|XP_002262988.2| PREDICTED: uncharacterized protein LOC100260...    56   3e-06
emb|CBI25196.3| unnamed protein product [Vitis vinifera]               56   3e-06
emb|CBI25204.3| unnamed protein product [Vitis vinifera]               56   4e-06

>ref|XP_003616250.1| Zinc finger protein [Medicago truncatula]
           gi|355517585|gb|AES99208.1| Zinc finger protein
           [Medicago truncatula]
          Length = 325

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/105 (37%), Positives = 47/105 (44%)
 Frame = -3

Query: 548 VKIDIKDEYKEFEKQIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVEMLKKKQ 369
           VK D+KDEYKEFEK IQ                                 E+VEMLK+K+
Sbjct: 221 VKPDVKDEYKEFEKLIQEDLQEVDDRMEEEEIDAAEMIEEAESVEQRNLKEKVEMLKRKR 280

Query: 368 LELRAARFGGQKSSTMXXXXXXXXXXXXXXXXXENFAVDWRAMHL 234
           LEL+A++    KSS +                 ENFAVDWRA HL
Sbjct: 281 LELKASKAKLSKSSGVVTKEARHEDSSSDDESGENFAVDWRAQHL 325


>ref|XP_002262930.1| PREDICTED: zinc finger protein 830-like [Vitis vinifera]
          Length = 297

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/108 (37%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = -3

Query: 551 PVKIDIKDEYKEFEKQIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVEMLKKK 372
           PVK D+KDEYKEFEK IQ                                 E+VEMLKKK
Sbjct: 190 PVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAESVEQKVYWEKVEMLKKK 249

Query: 371 QLELRAARFGGQ--KSSTMXXXXXXXXXXXXXXXXXENFAVDWRAMHL 234
           +LEL+AAR G Q  +                      NF VDWRA HL
Sbjct: 250 KLELKAARSGRQSKEPEVRGKGHSSKEDSSSDDDSDGNFMVDWRAQHL 297


>ref|XP_002262988.2| PREDICTED: uncharacterized protein LOC100260334 [Vitis vinifera]
          Length = 440

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/108 (36%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = -3

Query: 551 PVKIDIKDEYKEFEKQIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVEMLKKK 372
           PVK D+KDEYKEFEK IQ                                 E+VEMLKKK
Sbjct: 333 PVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAESVEQKVYWEKVEMLKKK 392

Query: 371 QLELRAARFG--GQKSSTMXXXXXXXXXXXXXXXXXENFAVDWRAMHL 234
           +LEL+AAR G   ++                      NF VDWRA HL
Sbjct: 393 KLELKAARSGRRSKEPEVRGKGHSSEEDSSSDDDSDGNFMVDWRAQHL 440


>emb|CBI25196.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/108 (36%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
 Frame = -3

Query: 551 PVKIDIKDEYKEFEKQIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVEMLKKK 372
           PVK D+KDEYKEFEK IQ                                 E+VEMLKKK
Sbjct: 291 PVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAESVEQKVYWEKVEMLKKK 350

Query: 371 QLELRAARFG--GQKSSTMXXXXXXXXXXXXXXXXXENFAVDWRAMHL 234
           +LEL+AAR G   ++                      NF VDWRA HL
Sbjct: 351 KLELKAARSGRRSKEPEVRGKGHSSEEDSSSDDDSDGNFMVDWRAQHL 398


>emb|CBI25204.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 39/108 (36%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
 Frame = -3

Query: 551 PVKIDIKDEYKEFEKQIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVEMLKKK 372
           PVK D+KDEYKEFEK IQ                                 E+VEMLKKK
Sbjct: 169 PVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEFDAAEMIEEAESVEQKVYWEKVEMLKKK 228

Query: 371 QLELRAARFG--GQKSSTMXXXXXXXXXXXXXXXXXENFAVDWRAMHL 234
           +LEL+AAR G   +                       NF VDWRA HL
Sbjct: 229 KLELKAARSGRRSKDPEVRGKGQSSKGDSSSGDDSDGNFTVDWRAQHL 276


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