BLASTX nr result

ID: Coptis25_contig00024132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024132
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29214.3| unnamed protein product [Vitis vinifera]              267   3e-69
ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB...   267   3e-69
ref|XP_002448465.1| hypothetical protein SORBIDRAFT_06g027580 [S...   261   1e-67
ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB...   260   3e-67
ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB...   258   1e-66

>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  267 bits (682), Expect = 3e-69
 Identities = 126/182 (69%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
 Frame = +3

Query: 3    YEFLYQTRNVNTKHHLGQLPSFLSPILENISSFPNI---TDNLLDQLTVNEYPPGVGLSP 173
            YEF Y+TRNVNTK +LG+LPSF+S I+E ISSFPN+    D +LDQLTVNEYPPGVGLSP
Sbjct: 729  YEFCYETRNVNTKQYLGKLPSFVSAIVERISSFPNLESAADIVLDQLTVNEYPPGVGLSP 788

Query: 174  HIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLPPSSSPDKIGENPQ----VFKKALFL 341
            HIDTHSAF+G IFSLSLAGPC+M+FR+Y++G W   +SS D   E P       ++A++L
Sbjct: 789  HIDTHSAFEGFIFSLSLAGPCIMDFRRYTEGVWPKSASSSDMSVEYPDKSSSFLRRAIYL 848

Query: 342  PPRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIKRSSRRVSFTLRKVRNGPCCCEFPQYC 521
            PPRSMLLLSGEARYAWHHYIPHHK+D V+ ++I+R  RRVSFT RKVR GPC CEFPQYC
Sbjct: 849  PPRSMLLLSGEARYAWHHYIPHHKIDMVKDSVIRRGPRRVSFTFRKVRTGPCQCEFPQYC 908

Query: 522  DS 527
            DS
Sbjct: 909  DS 910


>ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Vitis
           vinifera]
          Length = 349

 Score =  267 bits (682), Expect = 3e-69
 Identities = 126/182 (69%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
 Frame = +3

Query: 3   YEFLYQTRNVNTKHHLGQLPSFLSPILENISSFPNI---TDNLLDQLTVNEYPPGVGLSP 173
           YEF Y+TRNVNTK +LG+LPSF+S I+E ISSFPN+    D +LDQLTVNEYPPGVGLSP
Sbjct: 166 YEFCYETRNVNTKQYLGKLPSFVSAIVERISSFPNLESAADIVLDQLTVNEYPPGVGLSP 225

Query: 174 HIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLPPSSSPDKIGENPQ----VFKKALFL 341
           HIDTHSAF+G IFSLSLAGPC+M+FR+Y++G W   +SS D   E P       ++A++L
Sbjct: 226 HIDTHSAFEGFIFSLSLAGPCIMDFRRYTEGVWPKSASSSDMSVEYPDKSSSFLRRAIYL 285

Query: 342 PPRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIKRSSRRVSFTLRKVRNGPCCCEFPQYC 521
           PPRSMLLLSGEARYAWHHYIPHHK+D V+ ++I+R  RRVSFT RKVR GPC CEFPQYC
Sbjct: 286 PPRSMLLLSGEARYAWHHYIPHHKIDMVKDSVIRRGPRRVSFTFRKVRTGPCQCEFPQYC 345

Query: 522 DS 527
           DS
Sbjct: 346 DS 347


>ref|XP_002448465.1| hypothetical protein SORBIDRAFT_06g027580 [Sorghum bicolor]
           gi|241939648|gb|EES12793.1| hypothetical protein
           SORBIDRAFT_06g027580 [Sorghum bicolor]
          Length = 349

 Score =  261 bits (668), Expect = 1e-67
 Identities = 123/184 (66%), Positives = 149/184 (80%), Gaps = 6/184 (3%)
 Frame = +3

Query: 3   YEFLYQTRNVNTKHHLGQLPSFLSPILENISSFPNITD---NLLDQLTVNEYPPGVGLSP 173
           YEFLY+TRNV++K  LG+LP+F+S +LE I+SFP + D   +L+DQLTVNEYP GVGLSP
Sbjct: 164 YEFLYETRNVDSKQFLGELPTFVSTVLEKIASFPGVKDCTTSLVDQLTVNEYPCGVGLSP 223

Query: 174 HIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLPPS---SSPDKIGENPQVFKKALFLP 344
           HIDTHSAF+  IFSLSLAGPC+MEFRKY++GSW  PS      +   + P   +KA+FLP
Sbjct: 224 HIDTHSAFEEMIFSLSLAGPCIMEFRKYTKGSWRAPSVVNGVDEDSSQEPGCIRKAIFLP 283

Query: 345 PRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIKRSSRRVSFTLRKVRNGPCCCEFPQYCD 524
           PRSMLL+SGE RYAWHHYIPHHK+DAV G +IKR+SRRVSFT RKVR GPC CE+ Q+CD
Sbjct: 284 PRSMLLMSGEGRYAWHHYIPHHKIDAVGGQVIKRNSRRVSFTFRKVRMGPCDCEYKQFCD 343

Query: 525 SQSR 536
           S S+
Sbjct: 344 SHSK 347


>ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Glycine max]
          Length = 342

 Score =  260 bits (665), Expect = 3e-67
 Identities = 127/185 (68%), Positives = 150/185 (81%), Gaps = 9/185 (4%)
 Frame = +3

Query: 3   YEFLYQTRNVNTKHHLGQLPSFLSPILENISSFP---NITDNLLDQLTVNEYPPGVGLSP 173
           YEF Y  RNVNT+H LG+LPSF+SPIL+ ISS P   N+ + +LDQLTVNEYPPGVGLSP
Sbjct: 158 YEFRYDIRNVNTRHCLGELPSFVSPILDRISSCPTFENVKNIVLDQLTVNEYPPGVGLSP 217

Query: 174 HIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLP--PSSSPDKIGENPQ----VFKKAL 335
           HIDTHSAF+  IFSLSL+GPC+MEFR+Y  G WLP   SS+  KI ENP+      ++A+
Sbjct: 218 HIDTHSAFEDLIFSLSLSGPCIMEFRRYENGDWLPRVASSAVAKI-ENPEDQSNFIRRAI 276

Query: 336 FLPPRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIKRSSRRVSFTLRKVRNGPCCCEFPQ 515
           +LPPRS+LLLSGEARYAWHHYIPHHK+D V G +I+R+SRRVSFT RKVR G C CEFPQ
Sbjct: 277 YLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGKVIRRASRRVSFTFRKVREGLCKCEFPQ 336

Query: 516 YCDSQ 530
           YCDS+
Sbjct: 337 YCDSR 341


>ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Cucumis sativus] gi|449523025|ref|XP_004168525.1|
           PREDICTED: alkylated DNA repair protein alkB homolog
           8-like [Cucumis sativus]
          Length = 344

 Score =  258 bits (660), Expect = 1e-66
 Identities = 125/183 (68%), Positives = 143/183 (78%), Gaps = 7/183 (3%)
 Frame = +3

Query: 3   YEFLYQTRNVNTKHHLGQLPSFLSPILENISSFPN---ITDNLLDQLTVNEYPPGVGLSP 173
           YEF YQTRNVNTKH LG+LPSF+S +++ IS FPN   I D  LDQLTVNEYPPGVGLSP
Sbjct: 161 YEFCYQTRNVNTKHQLGELPSFVSHVVDRISMFPNTEDIADASLDQLTVNEYPPGVGLSP 220

Query: 174 HIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLPPSSSPDKIGENP----QVFKKALFL 341
           HIDTHSAF+G IFSLSLAGPC+MEFR+Y +G+W    SS D   EN        +KA++L
Sbjct: 221 HIDTHSAFEGLIFSLSLAGPCIMEFRRYPEGTWHKFPSSIDLKMENSVNDSNYLRKAIYL 280

Query: 342 PPRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIKRSSRRVSFTLRKVRNGPCCCEFPQYC 521
           PPRSMLLLSGEARY WHHYIPHHK+D V+ + I+R  RRVSFT RKVR  PC C+FP YC
Sbjct: 281 PPRSMLLLSGEARYVWHHYIPHHKIDMVKDSSIRRGRRRVSFTFRKVRTDPCQCKFPHYC 340

Query: 522 DSQ 530
           DSQ
Sbjct: 341 DSQ 343


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