BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024106
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    55   5e-06

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
 Frame = +3

Query: 36  RIKDCK---WYPPEGDIIKVNVDGDSCGNPGPSSYGVCFRNYECVFLASLCRNIGHQTNF 206
           R+  C+   W PP G  +K+N DG   G+P   S GV FR  + +F  +  +NIG+ T  
Sbjct: 236 RVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATAL 295

Query: 207 IAECLAILEAVEYA 248
            AE  A + A+E A
Sbjct: 296 EAEYSACMFAIEKA 309