BLASTX nr result

ID: Coptis25_contig00024097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024097
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit ...   192   3e-47
emb|CBI37693.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_002283561.1| PREDICTED: COP9 signalosome complex subunit ...   192   3e-47
ref|XP_002527960.1| jun activation domain binding protein, putat...   189   2e-46
ref|NP_001234331.1| JAB [Solanum lycopersicum] gi|12002865|gb|AA...   188   5e-46

>ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Cucumis
           sativus] gi|449499546|ref|XP_004160845.1| PREDICTED:
           COP9 signalosome complex subunit 5a-like [Cucumis
           sativus]
          Length = 365

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/107 (86%), Positives = 99/107 (92%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   FGVHCKQYYSLDITYFKSSLDCRLLDLLWNKYWVNTLSSSPLLANRDYVAGQISDLAEKL 181
           FGVHCKQYY+LDITYFKSSLDC LLDLLWNKYWVNTLSSSPLL N DYVAGQISDLAEKL
Sbjct: 227 FGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKL 286

Query: 182 EQAENHL-HTRLGPMVLPTQRKKEEDSQLAKITRDSSKITVEQVHGL 319
           EQ EN L H+R GP++ P+QRKKEEDSQLAKITRDS+KITVEQVHGL
Sbjct: 287 EQVENQLAHSRFGPLIAPSQRKKEEDSQLAKITRDSAKITVEQVHGL 333


>emb|CBI37693.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/107 (86%), Positives = 100/107 (93%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   FGVHCKQYYSLDITYFKSSLDCRLLDLLWNKYWVNTLSSSPLLANRDYVAGQISDLAEKL 181
           FGVHCKQYY+LDITYFKSSLDC LLDLLWNKYWVNTLSSSPLL N DYVAGQISDLAEKL
Sbjct: 122 FGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKL 181

Query: 182 EQAENHL-HTRLGPMVLPTQRKKEEDSQLAKITRDSSKITVEQVHGL 319
           EQAEN L H+R GP++ P+QRKKEE+SQLAKITRDS+KITVEQVHGL
Sbjct: 182 EQAENQLAHSRFGPLIAPSQRKKEEESQLAKITRDSAKITVEQVHGL 228


>ref|XP_002283561.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Vitis
           vinifera]
          Length = 360

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/107 (86%), Positives = 100/107 (93%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   FGVHCKQYYSLDITYFKSSLDCRLLDLLWNKYWVNTLSSSPLLANRDYVAGQISDLAEKL 181
           FGVHCKQYY+LDITYFKSSLDC LLDLLWNKYWVNTLSSSPLL N DYVAGQISDLAEKL
Sbjct: 222 FGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKL 281

Query: 182 EQAENHL-HTRLGPMVLPTQRKKEEDSQLAKITRDSSKITVEQVHGL 319
           EQAEN L H+R GP++ P+QRKKEE+SQLAKITRDS+KITVEQVHGL
Sbjct: 282 EQAENQLAHSRFGPLIAPSQRKKEEESQLAKITRDSAKITVEQVHGL 328


>ref|XP_002527960.1| jun activation domain binding protein, putative [Ricinus communis]
           gi|223532586|gb|EEF34372.1| jun activation domain
           binding protein, putative [Ricinus communis]
          Length = 367

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/107 (85%), Positives = 98/107 (91%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   FGVHCKQYYSLDITYFKSSLDCRLLDLLWNKYWVNTLSSSPLLANRDYVAGQISDLAEKL 181
           FGVHCKQYY+LDITYFKSSLDC LLDLLWNKYWVNTLSSSPLL N DYVAGQISDLAEKL
Sbjct: 229 FGVHCKQYYALDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKL 288

Query: 182 EQAENHL-HTRLGPMVLPTQRKKEEDSQLAKITRDSSKITVEQVHGL 319
           EQAEN L H+R GP++ P QRKKEE+SQL KITRDS+KITVEQVHGL
Sbjct: 289 EQAENQLAHSRFGPLIAPPQRKKEEESQLTKITRDSAKITVEQVHGL 335


>ref|NP_001234331.1| JAB [Solanum lycopersicum] gi|12002865|gb|AAG43411.1| JAB [Solanum
           lycopersicum]
          Length = 367

 Score =  188 bits (477), Expect = 5e-46
 Identities = 93/107 (86%), Positives = 98/107 (91%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   FGVHCKQYYSLDITYFKSSLDCRLLDLLWNKYWVNTLSSSPLLANRDYVAGQISDLAEKL 181
           FGVHCKQYYSLDITYFKSSLDC LLDLLWNKYWVNTLSSSPLL N DYVAGQISDLAEK+
Sbjct: 229 FGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLENGDYVAGQISDLAEKM 288

Query: 182 EQAENHL-HTRLGPMVLPTQRKKEEDSQLAKITRDSSKITVEQVHGL 319
           EQAENHL H+R G +V   QRKKEE+SQLAKITRDS+KITVEQVHGL
Sbjct: 289 EQAENHLSHSRFGHLVAAPQRKKEEESQLAKITRDSAKITVEQVHGL 335


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