BLASTX nr result

ID: Coptis25_contig00024090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024090
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   172   5e-41
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              172   5e-41
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   139   3e-31
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   115   6e-24
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   111   9e-23

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  172 bits (435), Expect = 5e-41
 Identities = 94/196 (47%), Positives = 124/196 (63%)
 Frame = +3

Query: 21   DKSSDCEAKFASSFNETLVLIRVAYEKFGSLTNGLTHCEDSLSENINQWKVLVGSYRANM 200
            +  S+ EA F+ +F  TL  I  A++K G L N     E S S+NI  WKVL  SY  N+
Sbjct: 4277 ENHSELEAGFSGAFERTLKHIMDAFQKLGPLNNTCALSEWS-SDNITSWKVLFESYVMNL 4335

Query: 201  KLDCIHKQLGETITTAVHLIDNAGKRISNVDSQIQTCXXXXXXXXXXXXXXGDGFLLEFI 380
            +LD I  +L +TI  A  L++++G +I ++  Q++T                DG L +F+
Sbjct: 4336 QLDSICDELHKTIFYAGKLLNHSGNKIPSLCFQVETYFKHLYQLLDLVSGFSDGLLHDFL 4395

Query: 381  TMHKKVAEMTHMLANVFVSLYSKGFGASTEDQTDDTGGDMSQDASGTGMGEGAGVNDVSD 560
             +HKKV+ MTH+LANVF SLYS+GFG  TEDQ DD   D S+DA GTGMGEG G+ DVSD
Sbjct: 4396 DVHKKVSMMTHVLANVFASLYSEGFGTPTEDQIDDNSHDTSKDAKGTGMGEGVGLKDVSD 4455

Query: 561  QIENEDQLVGCSEKPS 608
            QI +EDQL+G SEKPS
Sbjct: 4456 QITDEDQLLGASEKPS 4471


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  172 bits (435), Expect = 5e-41
 Identities = 94/196 (47%), Positives = 124/196 (63%)
 Frame = +3

Query: 21   DKSSDCEAKFASSFNETLVLIRVAYEKFGSLTNGLTHCEDSLSENINQWKVLVGSYRANM 200
            +  S+ EA F+ +F  TL  I  A++K G L N     E S S+NI  WKVL  SY  N+
Sbjct: 4278 ENHSELEAGFSGAFERTLKHIMDAFQKLGPLNNTCALSEWS-SDNITSWKVLFESYVMNL 4336

Query: 201  KLDCIHKQLGETITTAVHLIDNAGKRISNVDSQIQTCXXXXXXXXXXXXXXGDGFLLEFI 380
            +LD I  +L +TI  A  L++++G +I ++  Q++T                DG L +F+
Sbjct: 4337 QLDSICDELHKTIFYAGKLLNHSGNKIPSLCFQVETYFKHLYQLLDLVSGFSDGLLHDFL 4396

Query: 381  TMHKKVAEMTHMLANVFVSLYSKGFGASTEDQTDDTGGDMSQDASGTGMGEGAGVNDVSD 560
             +HKKV+ MTH+LANVF SLYS+GFG  TEDQ DD   D S+DA GTGMGEG G+ DVSD
Sbjct: 4397 DVHKKVSMMTHVLANVFASLYSEGFGTPTEDQIDDNSHDTSKDAKGTGMGEGVGLKDVSD 4456

Query: 561  QIENEDQLVGCSEKPS 608
            QI +EDQL+G SEKPS
Sbjct: 4457 QITDEDQLLGASEKPS 4472


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  139 bits (351), Expect = 3e-31
 Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 7/209 (3%)
 Frame = +3

Query: 3    DNDASSDKSSDC-------EAKFASSFNETLVLIRVAYEKFGSLTNGLTHCEDSLSENIN 161
            ++  +S+KS+ C       +A F  +  +T  ++    ++  SL++     E  LSENI 
Sbjct: 4241 ESSNTSEKSNCCYESCSKLDAMFGGALRKTFEVLVNVLKRQCSLSSECALSE-KLSENIT 4299

Query: 162  QWKVLVGSYRANMKLDCIHKQLGETITTAVHLIDNAGKRISNVDSQIQTCXXXXXXXXXX 341
             W+ L  S   N+ ++ ++  L +TI  A  +I  +G   S +   +  C          
Sbjct: 4300 SWEFLFKSLVENLNVEGLYDNLLKTIFCAEKMISRSGSEASPLSFHLGACFEHLHALSDL 4359

Query: 342  XXXXGDGFLLEFITMHKKVAEMTHMLANVFVSLYSKGFGASTEDQTDDTGGDMSQDASGT 521
                G+G L + + MHK+V+ MTH+LANV  SL+SKGFG+  +++ DD     SQDA+GT
Sbjct: 4360 VLTFGEGLLQDLLAMHKRVSVMTHVLANVLASLFSKGFGSPAKEEEDDARNGKSQDATGT 4419

Query: 522  GMGEGAGVNDVSDQIENEDQLVGCSEKPS 608
            GMGEG+GVNDVS+QI +EDQL+G S+KPS
Sbjct: 4420 GMGEGSGVNDVSEQITDEDQLLGTSDKPS 4448


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score =  115 bits (288), Expect = 6e-24
 Identities = 65/150 (43%), Positives = 87/150 (58%)
 Frame = +3

Query: 153  NINQWKVLVGSYRANMKLDCIHKQLGETITTAVHLIDNAGKRISNVDSQIQTCXXXXXXX 332
            N+  W++    + AN+ LD +   L +TIT    L++     IS+  S++          
Sbjct: 4087 NLGSWEL---QFVANLSLDMLCDDLFKTITFGAKLVNCCDNNISS-SSKVGAHFQNLHTL 4142

Query: 333  XXXXXXXGDGFLLEFITMHKKVAEMTHMLANVFVSLYSKGFGASTEDQTDDTGGDMSQDA 512
                    D  L  F  MHK VA  TH++AN+ VSL+SKGFG  TE+Q DD   D S+DA
Sbjct: 4143 VDLLLKFSDELLKNFFAMHKSVAVTTHVIANILVSLFSKGFGRLTENQEDDGTLDKSEDA 4202

Query: 513  SGTGMGEGAGVNDVSDQIENEDQLVGCSEK 602
            SGTGMGEG G+NDVSDQI +EDQL+G  E+
Sbjct: 4203 SGTGMGEGVGLNDVSDQITDEDQLLGTREQ 4232


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  111 bits (278), Expect = 9e-23
 Identities = 77/199 (38%), Positives = 108/199 (54%), Gaps = 1/199 (0%)
 Frame = +3

Query: 9    DASSDKSSDCEAKFASSFNETLVLIRVAYEKFGSLTNGLTHCEDSLSENINQWKVLVGSY 188
            D +S  +   EA F S+  +   L+  A EK  S  +G    E+SL ENI+ W+ L  S 
Sbjct: 4323 DYNSGNNYQLEADFDSALKKAHNLVMEALEKQISPGDGGALSEESL-ENISSWEYLFKSS 4381

Query: 189  RANMKLDCIHKQLGETITTA-VHLIDNAGKRISNVDSQIQTCXXXXXXXXXXXXXXGDGF 365
              ++ ++ +   L   IT A +HL+         ++  +  C               DG 
Sbjct: 4382 VQSLNVEELCDILLNIITCAHLHLL---------LELILGFC---------------DGL 4417

Query: 366  LLEFITMHKKVAEMTHMLANVFVSLYSKGFGASTEDQTDDTGGDMSQDASGTGMGEGAGV 545
            L + + MHK V+ M+  LANV  SL+SKGFG   +D+ D+   D SQ ASGTGMGEG+G+
Sbjct: 4418 LQDLLAMHKTVSIMSRELANVLASLFSKGFGIPVKDEVDEASHDTSQTASGTGMGEGSGL 4477

Query: 546  NDVSDQIENEDQLVGCSEK 602
            NDVSDQI +EDQL+G SEK
Sbjct: 4478 NDVSDQITDEDQLLGTSEK 4496


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