BLASTX nr result

ID: Coptis25_contig00024089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024089
         (2013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270383.1| PREDICTED: xyloglucan galactosyltransferase ...   555   e-155
ref|XP_002300452.1| predicted protein [Populus trichocarpa] gi|2...   529   e-147
ref|XP_002888666.1| exostosin family protein [Arabidopsis lyrata...   528   e-147
dbj|BAC42883.1| unknown protein [Arabidopsis thaliana]                527   e-147
ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|2...   527   e-147

>ref|XP_002270383.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Vitis
            vinifera]
          Length = 511

 Score =  555 bits (1429), Expect = e-155
 Identities = 261/390 (66%), Positives = 315/390 (80%)
 Frame = +2

Query: 533  SLFVYVYNMPAKFNVDLLQDCRHLNMYTDMCPHVANCGLGQAIDINVNGKSSTSSWYATH 712
            S+ VYVY +P KFN+ LL++CR LN+YTDMCPHVANCGLGQ I          SSW+ATH
Sbjct: 122  SVLVYVYELPPKFNIGLLKECRRLNVYTDMCPHVANCGLGQPI------LEMGSSWFATH 175

Query: 713  QFIAEMIFHARVENHPCRTWEQEKATLFYVPFYGGLHASSKFREADLVERDRLALEMVEY 892
            QFIAEMIFHAR+ENHPCRT + EKA LFYVPFYGGLHASSKFRE++L  RD LA+E+VEY
Sbjct: 176  QFIAEMIFHARMENHPCRTRDPEKADLFYVPFYGGLHASSKFRESNLAARDALAVELVEY 235

Query: 893  LRQQPWWQRKQGRDHFLALGRTAWDFMRTKEGQDFGANCLLNLPEVKNMSVLTVERHPWE 1072
            + +Q WW+R  G DHFLALGRTAWDFMRT  G DFGAN LLNLP VKNMSVLTVERHPWE
Sbjct: 236  IHRQRWWRRNHGADHFLALGRTAWDFMRTDGGTDFGANRLLNLPPVKNMSVLTVERHPWE 295

Query: 1073 GHNQHGIPYPSYLHPSTSLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDEILRQC 1252
            G NQ+GIPYPSY HPSTS E++ WQ++MR   R HLFSF+GAPR GV+KAAIRDE+++QC
Sbjct: 296  GSNQYGIPYPSYFHPSTSNEILTWQNRMRLQRRLHLFSFIGAPRNGVEKAAIRDEVIKQC 355

Query: 1253 SSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFF 1432
            + S  C+LLKC  GAS+CH P+ VL VMT+S+FC+QAPGDSFTRRSTFDS LAGCIPVF 
Sbjct: 356  AESARCHLLKCGSGASQCHEPTQVLNVMTQSEFCIQAPGDSFTRRSTFDSFLAGCIPVFV 415

Query: 1433 SSHTAYTQYAWYLPQEKSEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRSTVISLIPRLT 1612
            S HTAY+QY+W+LP + + YSV+  +E+    IE  L KIP ++++KMR+ VI+LIP LT
Sbjct: 416  SPHTAYSQYSWFLPSDHTTYSVFIGDENPS--IEAELLKIPNDQIQKMRNRVINLIPNLT 473

Query: 1613 YMHPNATTTHFQFKDAVDIALEQLSKHINS 1702
            Y+HPN  ++ F F DAVD+AL +LS ++ S
Sbjct: 474  YIHPN--SSDFGFTDAVDVALGKLSDYVKS 501


>ref|XP_002300452.1| predicted protein [Populus trichocarpa] gi|222847710|gb|EEE85257.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  529 bits (1363), Expect = e-147
 Identities = 259/397 (65%), Positives = 306/397 (77%), Gaps = 10/397 (2%)
 Frame = +2

Query: 524  CDGSLFVYVYNMPAKFNVDLLQDCRHLNMYTDMCPHVANCGLGQAIDINVNGKSSTSSWY 703
            C+G + VY+Y+MPA+FN  LL+DC HLN YTDMCPHVAN GLGQ +        +T+ W+
Sbjct: 1    CEGGMSVYLYDMPAEFNKGLLKDCSHLNPYTDMCPHVANRGLGQPLSYMAESAVATT-WF 59

Query: 704  ATHQFIAEMIFHARVENHPCRTWEQEKATLFYVPFYGGLHASSKFREADLVERDRLALEM 883
            ATHQFIAEMIFHAR+ENHPCR  +   A LFYVPFYGGL ASSKF +A+L  RD LA+ +
Sbjct: 60   ATHQFIAEMIFHARMENHPCRVLDPINAKLFYVPFYGGLDASSKFHDANLTARDELAVRL 119

Query: 884  VEYLRQQPWWQRKQGRDHFLALGRTAWDFMRTKEGQDFGANCLLNLPEVKNMSVLTVERH 1063
             +YLR +PWW+R  G+DHFL LGRTAWDF+R     DFG N LLNLP+V+NMSVLTVER+
Sbjct: 120  ADYLRSKPWWERHHGKDHFLVLGRTAWDFLR--RNNDFG-NSLLNLPDVQNMSVLTVERN 176

Query: 1064 PWEG-HNQHGIPYPSYLHPSTSLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDEI 1240
            PW+  HNQHGIPYPSY HP TS E++ WQ+KMR++ RPHLFSF+G PR GV+KAA+RDE+
Sbjct: 177  PWDRVHNQHGIPYPSYFHPYTSHEMMTWQNKMRQSSRPHLFSFIGGPRRGVEKAAVRDEL 236

Query: 1241 LRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGCI 1420
            +RQCS S  C LLKC +G SKCH+P +VLKVM++SQFCLQAPGDSFTRRSTFDSVLAGCI
Sbjct: 237  IRQCSESGRCKLLKCGKGPSKCHDPIEVLKVMSQSQFCLQAPGDSFTRRSTFDSVLAGCI 296

Query: 1421 PVFFSSHTAYTQYAWYLPQ-EKSEYSVYFPE--------EDRGAIIEEALRKIPKEKVEK 1573
            PVFFS HT YTQY W+ P  +  EYSVY  E          R   IEE L KI +EKVE+
Sbjct: 297  PVFFSPHTVYTQYEWFFPAGDAREYSVYIDENALKTGNGSKRVVSIEEELFKIEREKVER 356

Query: 1574 MRSTVISLIPRLTYMHPNATTTHFQFKDAVDIALEQL 1684
            MRS VI+L+PRLTY HPNAT   FQ  DAVD+ALE L
Sbjct: 357  MRSAVINLMPRLTYAHPNATDLGFQ--DAVDVALEAL 391


>ref|XP_002888666.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297334507|gb|EFH64925.1| exostosin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 457

 Score =  528 bits (1359), Expect = e-147
 Identities = 246/391 (62%), Positives = 304/391 (77%)
 Frame = +2

Query: 518  KKCDGSLFVYVYNMPAKFNVDLLQDCRHLNMYTDMCPHVANCGLGQAIDINVNGKSSTSS 697
            +KC  +  VYVY++P +FN+ +LQ+CRHLN+YT+MCPHVAN GLGQ +      +S  +S
Sbjct: 65   RKCYHNFTVYVYDLPKEFNIGILQNCRHLNIYTNMCPHVANNGLGQPLY-----RSGRTS 119

Query: 698  WYATHQFIAEMIFHARVENHPCRTWEQEKATLFYVPFYGGLHASSKFREADLVERDRLAL 877
            W+ATHQFIAEMIFHARV+NHPCRT E   A +FYVPFYGGL+ASS FRE +L  RD LA+
Sbjct: 120  WFATHQFIAEMIFHARVKNHPCRTCEPNNADIFYVPFYGGLYASSVFREQNLTNRDELAV 179

Query: 878  EMVEYLRQQPWWQRKQGRDHFLALGRTAWDFMRTKEGQDFGANCLLNLPEVKNMSVLTVE 1057
             +V+Y+  Q WW+R  GRDHFLA+GRTAWDFMR+ +  DFGAN L+ +P VKNMSVLTVE
Sbjct: 180  RLVDYISGQRWWKRSNGRDHFLAIGRTAWDFMRSSDTDDFGANMLMQMPRVKNMSVLTVE 239

Query: 1058 RHPWEGHNQHGIPYPSYLHPSTSLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDE 1237
            R PW+G N  GIPYPSY HP TS E+V WQDKMRR +RP+LFSFVG PR G++KAAIRD+
Sbjct: 240  RQPWKGDNHFGIPYPSYFHPYTSAEMVTWQDKMRRVDRPNLFSFVGGPRKGLEKAAIRDK 299

Query: 1238 ILRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGC 1417
            +++QC+ S  C LLKCE G S+CH+P  VL VM +S+FCLQAPGDS+TRRSTFD++LAGC
Sbjct: 300  LIKQCAESSHCELLKCENGGSRCHDPMTVLGVMARSRFCLQAPGDSYTRRSTFDAMLAGC 359

Query: 1418 IPVFFSSHTAYTQYAWYLPQEKSEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRSTVISL 1597
            IPVFFS HT YTQY WYLP +K  YSV F +E     IE+ L +I + +V +MR TVI L
Sbjct: 360  IPVFFSPHTMYTQYLWYLPDDKRSYSV-FMDEKNNTHIEQELLRISESEVVQMRETVIDL 418

Query: 1598 IPRLTYMHPNATTTHFQFKDAVDIALEQLSK 1690
            IP +TY HPNA  T++   DAVD+ALE L+K
Sbjct: 419  IPSVTYAHPNA--TNYDLPDAVDVALEALAK 447


>dbj|BAC42883.1| unknown protein [Arabidopsis thaliana]
          Length = 455

 Score =  527 bits (1357), Expect = e-147
 Identities = 249/391 (63%), Positives = 302/391 (77%)
 Frame = +2

Query: 518  KKCDGSLFVYVYNMPAKFNVDLLQDCRHLNMYTDMCPHVANCGLGQAIDINVNGKSSTSS 697
            + CD +  VYVY++P +FN+ LLQ+CRHLN+YT+MCPHVAN GLGQ +          +S
Sbjct: 65   RTCDHNFTVYVYDLPKEFNIGLLQNCRHLNIYTNMCPHVANNGLGQPLH------RGRTS 118

Query: 698  WYATHQFIAEMIFHARVENHPCRTWEQEKATLFYVPFYGGLHASSKFREADLVERDRLAL 877
            W++THQFIAEMIFHARVENHPCRT+E + A +FYVPFYGGL+ASS FRE +L +RD LA+
Sbjct: 119  WFSTHQFIAEMIFHARVENHPCRTYEPDTADIFYVPFYGGLYASSVFREQNLTKRDELAV 178

Query: 878  EMVEYLRQQPWWQRKQGRDHFLALGRTAWDFMRTKEGQDFGANCLLNLPEVKNMSVLTVE 1057
             +V Y+  Q WW+R  GRDHFLA+GRTAWDFMR+ +  DFGAN L+ +P V NMSVLTVE
Sbjct: 179  RLVNYISGQRWWKRSNGRDHFLAIGRTAWDFMRSSD-TDFGANMLMQMPRVMNMSVLTVE 237

Query: 1058 RHPWEGHNQHGIPYPSYLHPSTSLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDE 1237
            R PW G N  GIPYPSY HP TS E+V WQDKM+  ERP+LFSFVG PR G++KAAIRDE
Sbjct: 238  RQPWNGDNHFGIPYPSYFHPYTSAEMVTWQDKMKNVERPNLFSFVGGPRKGLEKAAIRDE 297

Query: 1238 ILRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGC 1417
            +++QC+ S  C LLKCE G S+CHNP  VL VM +S+FCLQAPGDSFTRRSTFD++LAGC
Sbjct: 298  LIKQCAESSHCELLKCENGGSRCHNPMTVLGVMARSRFCLQAPGDSFTRRSTFDAMLAGC 357

Query: 1418 IPVFFSSHTAYTQYAWYLPQEKSEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRSTVISL 1597
            IPVFFS HT YTQY WYLP +K  YSV F +E   A IE+ L +I + +V +MR  VI L
Sbjct: 358  IPVFFSPHTMYTQYMWYLPDDKRSYSV-FMDEKNNAHIEQELLRISENEVVQMREIVIDL 416

Query: 1598 IPRLTYMHPNATTTHFQFKDAVDIALEQLSK 1690
            IPRLTY HPN  +T++   DAVDIALE L+K
Sbjct: 417  IPRLTYAHPN--STNYDLPDAVDIALEALAK 445


>ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|222873674|gb|EEF10805.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  527 bits (1357), Expect = e-147
 Identities = 258/398 (64%), Positives = 306/398 (76%), Gaps = 10/398 (2%)
 Frame = +2

Query: 521  KCDGSLFVYVYNMPAKFNVDLLQDCRHLNMYTDMCPHVANCGLGQAIDINVNGKSSTSSW 700
            KC+G + VY+Y+MPA+FN  LL+DC HLN YTDMCPHVAN GLGQ +        +T+ W
Sbjct: 21   KCEGGMSVYLYDMPAEFNKGLLKDCSHLNAYTDMCPHVANRGLGQPLSYMAESAVATT-W 79

Query: 701  YATHQFIAEMIFHARVENHPCRTWEQEKATLFYVPFYGGLHASSKFREADLVERDRLALE 880
            +ATHQFIAEMIFHAR+ENHPCR  +   A LFYVPFYGGL ASSKF +A+L  RD LA+ 
Sbjct: 80   FATHQFIAEMIFHARMENHPCRVLDPINAKLFYVPFYGGLDASSKFHDANLTARDELAVR 139

Query: 881  MVEYLRQQPWWQRKQGRDHFLALGRTAWDFMRTKEGQDFGANCLLNLPEVKNMSVLTVER 1060
            + +YLR +PWW+R  G+DHFL LGRTAWDF+R     +FG N LLNLP+V+NMSVLTVER
Sbjct: 140  LADYLRSKPWWERHHGKDHFLVLGRTAWDFLR--RNNNFG-NSLLNLPDVQNMSVLTVER 196

Query: 1061 HPWEG-HNQHGIPYPSYLHPSTSLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDE 1237
            +PW+  HNQHGIPYPSY HP TS E++ WQ+KMR++ RPHLFSF+G PR GV+KAA+RDE
Sbjct: 197  NPWDRVHNQHGIPYPSYFHPYTSHEMMTWQNKMRQSSRPHLFSFIGGPRRGVEKAAVRDE 256

Query: 1238 ILRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGC 1417
            ++RQCS S  C LLKC +G SKCH P +VLKVM++SQFCLQAPGDSFTRRSTFDSVLAGC
Sbjct: 257  LIRQCSESGRCKLLKCGKGPSKCHYPIEVLKVMSQSQFCLQAPGDSFTRRSTFDSVLAGC 316

Query: 1418 IPVFFSSHTAYTQYAWYLPQ-EKSEYSVYFPE--------EDRGAIIEEALRKIPKEKVE 1570
            IPVFFS HT YTQY W+ P  +  EYSVY  E          R   IEE L KI +E+VE
Sbjct: 317  IPVFFSPHTVYTQYEWFFPAGDAREYSVYIDENALKTGNGSKRVVSIEEELFKIEREQVE 376

Query: 1571 KMRSTVISLIPRLTYMHPNATTTHFQFKDAVDIALEQL 1684
            +MRS VI+L+PRLTY HPNAT   FQ  DAVD+ALE L
Sbjct: 377  RMRSAVINLMPRLTYAHPNATDLGFQ--DAVDVALEAL 412


Top