BLASTX nr result

ID: Coptis25_contig00024081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024081
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15
ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002327346.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12

>ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|222838455|gb|EEE76820.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 18/190 (9%)
 Frame = -1

Query: 567 ILAEIISKLPI-KHMIGCQSVSRLWHHVISSICIPKIT-SSPVYGLIFN--------TCI 418
           +L EI+ ++   KH+I  +SV + W+++I+  C+PKI+ SSP++G I++        T I
Sbjct: 29  VLVEILCRVTDGKHLIRLKSVCKCWNNLITDACVPKISASSPLHGFIYHALRVSSRKTYI 88

Query: 417 PFPKCEMGTWSFACINAFSEKVGLPNASLVESCLGRRLPFDHSPNSLLDCCNGMLLFFDR 238
            +  C M           +  V       V+S     LPFD +    LDCCNG+LLF + 
Sbjct: 89  DYIPCAM-----------TPAVAPEPHEFVKS-YSSLLPFDLARGDFLDCCNGLLLFVEG 136

Query: 237 SSMQFYVYNPSTEQYIAIPNSPRRGGPPDGALFFD----PHFKIV--HVSGLSP--RLNI 82
              ++YV NP T+Q +AIP           +L FD    PH+++V    S L P  +L +
Sbjct: 137 PIPRYYVCNPVTKQCVAIPRDFTLENICTASLAFDPFKSPHYRVVCFDYSKLKPPQKLRV 196

Query: 81  YSQATRKWSV 52
           +S  T  W++
Sbjct: 197 FSSETGSWTI 206


>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
 Frame = -1

Query: 567 ILAEIISKLPI-KHMIGCQSVSRLWHHVISSICIPKIT-SSPVYGLIFNTCIPFPKCEMG 394
           +L EI+ ++   KH+I  +SV + W+++I+  C+PKI+ SSP++G I+       K   G
Sbjct: 29  VLVEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPLHGFIYLA----KKIGFG 84

Query: 393 TWSFACINAFSEKVGLPNASLVESCLGRRLPFDHSPNSLLDCCNGMLLFFDRSSMQFYVY 214
                 I         P            LPF+ +    LDCCNG+LLF +  ++Q+YV 
Sbjct: 85  KPYIDYIPCAITPAVAPEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFVEGCTLQYYVC 144

Query: 213 NPSTEQYIAIPNSPRRGGPPDGALFFD----PHFKIV----HVSGLSPRLNIYSQATRKW 58
           NP+T+  +AIP           AL FD    PH+++V      S    RL ++S  T  W
Sbjct: 145 NPATKHCVAIPRDFMLENIIFAALAFDPSTSPHYRVVCFDYSESRPPVRLQVFSSETGNW 204

Query: 57  S 55
           +
Sbjct: 205 T 205


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
 Frame = -1

Query: 567 ILAEIISKLPIKHMIGCQSVSRLWHHVISSICIPKITSSPVYGLIFNTCIPFPKCEMGTW 388
           I+ EI+ +LP+K ++  + VS+ WH +IS++C P  +++             P   +   
Sbjct: 9   IIVEILYQLPVKVVMRLKVVSKTWHRLISNVCAPLFSAA---------AAAHPSGFLFLC 59

Query: 387 SFACINAFSEKVGLPNASLVESCLGR----------RLPFDHSPNSLLDCCNGMLLFFDR 238
           SF  I          +   V  C+G+           LPF  S +   DCCNG+LLF  R
Sbjct: 60  SFQIIGGLGYFAAYASYPDVHDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLFVRR 119

Query: 237 SSMQ-----FYVYNPSTEQYIAIPNSPRRGGPPDGALFFD----PHFKIVHVSGLSP--- 94
              +     ++V N +T Q +AIPN   R  P   A+ +D    PH+K+V    L     
Sbjct: 120 EQREDLPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPHYKVVRFIYLEEKTS 179

Query: 93  ---RLNIYSQATRKW 58
              +L+I+S  T KW
Sbjct: 180 CPVKLDIFSSDTGKW 194


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
 Frame = -1

Query: 567 ILAEIISKLPIKHMIGCQSVSRLWHHVISSICIPKITSSPVYGLIFNTCIPFPKCEMGTW 388
           ++ EI+ +LP+K ++  + VS+ WH +IS++C P  +++             P   +   
Sbjct: 9   MIVEILCRLPVKVVMRLKVVSKAWHRLISNVCAPLFSAA---------AAAHPSGFLFLC 59

Query: 387 SFACINAFSEKVGLPNASLVESCLGR----------RLPFDHSPNSLLDCCNGMLLFFDR 238
           SF  I          +   V  C+G+           LPF  S +   DCCNG+LLF  R
Sbjct: 60  SFQIIGGLGYFAAYASYPDVRDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLFVRR 119

Query: 237 SSMQ-----FYVYNPSTEQYIAIPNSPRRGGPPDGALFFD----PHFKIVHVSGLSP--- 94
              +     ++V N +T Q +AIPN   R  P   A+ +D    PH+K+V    L     
Sbjct: 120 EQREALPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPHYKVVRFIYLEEKTS 179

Query: 93  ---RLNIYSQATRKW 58
              +L+I+S  T KW
Sbjct: 180 CPVKLDIFSSDTGKW 194


>ref|XP_002327346.1| predicted protein [Populus trichocarpa] gi|222835716|gb|EEE74151.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
 Frame = -1

Query: 567 ILAEIISKLPIKHMIGCQSVSRLWHHVISSICIPKITSSPVYGLIFNTCIPFPKCEMGTW 388
           ++ EI+ +LP+K ++   +VS+ WH +IS++C P  +++             P   +   
Sbjct: 9   MIIEILCRLPVKMVMRLNAVSKAWHRLISNVCAPLFSAA---------AAAHPSGFLFLC 59

Query: 387 SFACINAFSEKVGLPNASLVESCLGR----------RLPFDHSPNSLLDCCNGMLLFFDR 238
           SF  I          +   V  C+G+           LPF  S +   DCCNG+LLF  R
Sbjct: 60  SFQIIGGLGYFAAYASYPDVRDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLFVRR 119

Query: 237 SSMQ-----FYVYNPSTEQYIAIPNSPRRGGPPDGALFFD----PHFKIV 115
              +     ++V N +T Q +AIPN   R  P   A+ +D    PH+K+V
Sbjct: 120 EQREALPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPHYKVV 169


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