BLASTX nr result

ID: Coptis25_contig00024068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024068
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542002.1| PREDICTED: LOB domain-containing protein 11-...   114   6e-24
ref|XP_003547046.1| PREDICTED: LOB domain-containing protein 11-...   109   3e-22
ref|XP_002282070.1| PREDICTED: LOB domain-containing protein 11 ...   108   6e-22
ref|XP_002526340.1| LOB domain-containing protein, putative [Ric...   106   2e-21
ref|XP_003538040.1| PREDICTED: LOB domain-containing protein 1-l...    99   3e-19

>ref|XP_003542002.1| PREDICTED: LOB domain-containing protein 11-like [Glycine max]
          Length = 198

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/96 (58%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
 Frame = -2

Query: 285 YGSAGTVFQLHKQVNELQTQLAKAQAELVNMQFQQANLVALVCQEMS-AHCPQPSSPESI 109
           YG AG +  L KQVNELQ QLAKAQAE+VNMQFQQANLVAL+C EM+    PQ S  +S+
Sbjct: 103 YGCAGAICHLQKQVNELQAQLAKAQAEVVNMQFQQANLVALICMEMAQTQTPQESPQQSV 162

Query: 108 DHLIHTP---QGFQQNFGLLDDNNNNVSSAWEPLWT 10
           D+ I +P    G+Q N    ++N NN++S WEPLWT
Sbjct: 163 DNFISSPSHSSGYQNNLNFFEENTNNLNSLWEPLWT 198


>ref|XP_003547046.1| PREDICTED: LOB domain-containing protein 11-like [Glycine max]
          Length = 210

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 5/97 (5%)
 Frame = -2

Query: 285 YGSAGTVFQLHKQVNELQTQLAKAQAELVNMQFQQANLVALVCQEMS-AHCPQPSSP-ES 112
           YG AG + QL KQVNELQ QLAKAQAE+VNMQ QQANLVAL+C EM+    PQ  SP +S
Sbjct: 114 YGCAGAICQLQKQVNELQAQLAKAQAEVVNMQLQQANLVALICMEMAQTQTPQEYSPQQS 173

Query: 111 IDHLIHT---PQGFQQNFGLLDDNNNNVSSAWEPLWT 10
           +D+ I +     G+Q N    ++N NN++S WEPLWT
Sbjct: 174 VDNFISSTSHSSGYQNNLNFFEENTNNLNSLWEPLWT 210


>ref|XP_002282070.1| PREDICTED: LOB domain-containing protein 11 [Vitis vinifera]
           gi|297746208|emb|CBI16264.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/93 (60%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
 Frame = -2

Query: 285 YGSAGTVFQLHKQVNELQTQLAKAQAELVNMQFQQANLVALVCQEMS-AHCPQPSSPESI 109
           YG AG + QL KQ++ELQ QLAK QAELVNMQ QQANLV ++C EM  +  PQPSS ES+
Sbjct: 113 YGCAGAICQLQKQLDELQAQLAKTQAELVNMQCQQANLVTMICMEMEMSQSPQPSSEESL 172

Query: 108 DHLIHTPQGFQQNFGLLDDNNNNVSSAWEPLWT 10
           D LI +PQ +Q N   LDD  +N+ + WEPLWT
Sbjct: 173 DSLI-SPQSYQSNSFFLDD--SNIGATWEPLWT 202


>ref|XP_002526340.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223534299|gb|EEF36011.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 201

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/92 (61%), Positives = 67/92 (72%)
 Frame = -2

Query: 285 YGSAGTVFQLHKQVNELQTQLAKAQAELVNMQFQQANLVALVCQEMSAHCPQPSSPESID 106
           YG AG + QL KQVNELQ QLAKAQAE+VNMQ QQANL+AL+  EM A  PQ SS +SID
Sbjct: 113 YGCAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLMALIYMEM-AQSPQQSSEQSID 171

Query: 105 HLIHTPQGFQQNFGLLDDNNNNVSSAWEPLWT 10
             I TPQ +Q N   LD+  +N+ + WEPLWT
Sbjct: 172 DFITTPQSYQSNPCFLDE--SNLGTMWEPLWT 201


>ref|XP_003538040.1| PREDICTED: LOB domain-containing protein 1-like [Glycine max]
          Length = 204

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/97 (56%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
 Frame = -2

Query: 285 YGSAGTVFQLHKQVNELQTQLAKAQAELVNMQFQQANLVALVCQEMSAHCPQPSSPESID 106
           YG AG + QL KQVNELQ QLAKAQ ELVNMQ QQANLVAL+C EM A  PQ S  +S+D
Sbjct: 110 YGCAGAICQLQKQVNELQAQLAKAQGELVNMQLQQANLVALICMEM-AQSPQESPQQSVD 168

Query: 105 HLIHTPQ----GFQQNFGLLDDNNNNVSSAWE-PLWT 10
           + I TP      +Q      +D N +++S WE PLWT
Sbjct: 169 NFISTPPQSGGAYQSGMNFFED-NTSLNSLWEQPLWT 204


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