BLASTX nr result

ID: Coptis25_contig00024065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024065
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21665.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_003526894.1| PREDICTED: target of Myb protein 1-like [Gly...    93   2e-17
ref|XP_002513254.1| Hepatocyte growth factor-regulated tyrosine ...    92   4e-17
ref|NP_201169.1| ENTH/VHS/GAT family protein [Arabidopsis thalia...    91   1e-16
ref|XP_002864859.1| VHS domain-containing protein [Arabidopsis l...    91   1e-16

>emb|CBI21665.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 56/101 (55%), Positives = 69/101 (68%)
 Frame = +2

Query: 2   LDATQTSLGGASGKFPQYYAAYFELVSAGVKFSQAPRVLPIEVPTSIAQTNKISGGKPVF 181
           LDATQTSLGGAS KFPQYY+AY++LVSAGV+F Q P  +  + PTS    N   G + V 
Sbjct: 106 LDATQTSLGGASAKFPQYYSAYYDLVSAGVQFPQRPCAISSDPPTSQENRNSSPGVELVS 165

Query: 182 PKCAEIXXXXXXXXXXESSIIEKAAAALEVLRDVVNAIDSQ 304
            K  E+          ESSII+KA AALEVLRDV++A+D+Q
Sbjct: 166 SKHEEV-VQQASQVVPESSIIQKAGAALEVLRDVLDAVDTQ 205


>ref|XP_003526894.1| PREDICTED: target of Myb protein 1-like [Glycine max]
          Length = 402

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 50/102 (49%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   LDATQTSLGGASGKFPQYYAAYFELVSAGVKFSQAPRVLPIEVPTS-IAQTNKISGGKPV 178
           LDATQTSLGGASGKFPQYY AY++LVSAGV+F+Q  +V+    P+S  ++T+ +   +  
Sbjct: 106 LDATQTSLGGASGKFPQYYNAYYDLVSAGVQFAQRDQVVQSNNPSSQPSRTSNVPNREQA 165

Query: 179 FPKCAEIXXXXXXXXXXESSIIEKAAAALEVLRDVVNAIDSQ 304
            PK   +          ESSII+KA  ALEVL++V++ +D+Q
Sbjct: 166 SPKHEAVAQPAESQTVPESSIIQKAGNALEVLKEVLDVVDAQ 207


>ref|XP_002513254.1| Hepatocyte growth factor-regulated tyrosine kinase substrate,
           putative [Ricinus communis] gi|223547628|gb|EEF49122.1|
           Hepatocyte growth factor-regulated tyrosine kinase
           substrate, putative [Ricinus communis]
          Length = 415

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/101 (50%), Positives = 65/101 (64%)
 Frame = +2

Query: 2   LDATQTSLGGASGKFPQYYAAYFELVSAGVKFSQAPRVLPIEVPTSIAQTNKISGGKPVF 181
           LDATQTSLG ASGKFPQYY+AY++LVSAGV+F Q P        TS A+T     G+   
Sbjct: 107 LDATQTSLGSASGKFPQYYSAYYDLVSAGVQFPQRPPETKTNNSTSQAKTRSTLNGELAA 166

Query: 182 PKCAEIXXXXXXXXXXESSIIEKAAAALEVLRDVVNAIDSQ 304
            +   +          ESSII+KA  ALEVL++V++A+DSQ
Sbjct: 167 SRQEVVAQKAEPPVVPESSIIQKANNALEVLKEVLDAVDSQ 207


>ref|NP_201169.1| ENTH/VHS/GAT family protein [Arabidopsis thaliana]
           gi|10177045|dbj|BAB10457.1| unnamed protein product
           [Arabidopsis thaliana] gi|17065014|gb|AAL32661.1|
           Unknown protein [Arabidopsis thaliana]
           gi|21387125|gb|AAM47966.1| unknown protein [Arabidopsis
           thaliana] gi|332010397|gb|AED97780.1| ENTH/VHS/GAT
           family protein [Arabidopsis thaliana]
          Length = 447

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
 Frame = +2

Query: 2   LDATQTSLGGASGKFPQYYAAYFELVSAGVKFSQAPRVLPIEVPTSIAQTN----KISGG 169
           LDATQTSLGGASGKFPQYY AY+ELV+AGVKF+Q P   P+ V       N    +++  
Sbjct: 106 LDATQTSLGGASGKFPQYYTAYYELVNAGVKFTQRPNATPVVVTAQAVPRNTLNEQLASA 165

Query: 170 KPVFPKCAEIXXXXXXXXXXESSIIEKAAAALEVLRDVVNAIDSQ 304
           +   P   +            SSI++KA+ ALE+L++V++A+DSQ
Sbjct: 166 RNEGPATTQ---QRESQSVSPSSILQKASTALEILKEVLDAVDSQ 207


>ref|XP_002864859.1| VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310694|gb|EFH41118.1| VHS domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 447

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
 Frame = +2

Query: 2   LDATQTSLGGASGKFPQYYAAYFELVSAGVKFSQAPRVLPIEVPTSIAQTN----KISGG 169
           LDATQTSLGGASGKFPQYY AY++LV AGVKF+Q P   P+ V       N    +++  
Sbjct: 106 LDATQTSLGGASGKFPQYYTAYYDLVHAGVKFTQRPNATPVVVTAEAVPRNTLNEQLASA 165

Query: 170 KPVFPKCAEIXXXXXXXXXXESSIIEKAAAALEVLRDVVNAIDSQ 304
           +   P   ++           SSI++KA+ ALEVL++V++A+DSQ
Sbjct: 166 RSEGPATTQL---RESQTVSPSSILQKASTALEVLKEVLDAVDSQ 207


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