BLASTX nr result

ID: Coptis25_contig00024063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024063
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276028.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [...   416   e-114
ref|XP_002534162.1| acyltransferase, putative [Ricinus communis]...   416   e-114
ref|XP_002313455.1| beta-ketoacyl-coa synthase family protein [P...   412   e-113
ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, parti...   412   e-113
emb|CAN62551.1| hypothetical protein VITISV_002308 [Vitis vinifera]   412   e-113

>ref|XP_002276028.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [Vitis vinifera]
          Length = 460

 Score =  416 bits (1069), Expect = e-114
 Identities = 200/325 (61%), Positives = 252/325 (77%)
 Frame = +3

Query: 3    FCGNIIAKNKNLGPNEYRFVLKATVGSGIGEETYGPRNVLSGREESPTLLDGVFEIEECF 182
            FCG II +NKNLG  EY+F+L+A V S IGEETYGPR ++ GRE+ P L+DG+ E+EE F
Sbjct: 55   FCGEIIKRNKNLGHQEYKFLLRAIVSSSIGEETYGPRTIIDGREDCPCLMDGIQEMEEFF 114

Query: 183  YNTLDSLFAKSGVTPSEIHVLVVNISMFTSAPSPSSWIVNHYNMKEDIKVFNLSGMGCSA 362
            Y TLD+LF KSG++P ++ VLVVN+SM  S PS SS I+NHY M+ DIK FNLSGMGCSA
Sbjct: 115  YKTLDNLFEKSGISPLDVDVLVVNVSMLASVPSWSSRIINHYKMRNDIKAFNLSGMGCSA 174

Query: 363  TLLSINAVQNILSTHKNAFALVVSTECVGTNWYSGNDKSMMLPNCLFRSGGGAVLLTNKP 542
            +L+SI+ V+ I ++ KN+ A+VV++E +  NWYSGNDKSM+L NCLFRSGG ++LLTN  
Sbjct: 175  SLISIDLVRRIFNSRKNSLAIVVTSESIAPNWYSGNDKSMILSNCLFRSGGCSILLTNNK 234

Query: 543  SLRRQSMLKLKCLVRTHIGANDEAYQCAMQKEDDHGRLGVRLGKNLPKAATRAFVDNLRD 722
            +L+ QS+LKLKCL+RTH+G++DEA+ C MQKEDD GR G  L K++PKAA +AF +N+R+
Sbjct: 235  ALKDQSLLKLKCLIRTHMGSSDEAHSCCMQKEDDLGRKGFHLSKSVPKAANQAFTENIRE 294

Query: 723  LAPKVLPLTELVRYAIVSFFQXXXXXXXXXXXXXXAVINFRTGVDHFALHAGGTAVIDGI 902
            LAPK LPL EL+RY  VS F               A +NF+TGVDHF LH GGTA+IDG+
Sbjct: 295  LAPKALPLRELLRYTAVSTF------FHYTKGGFKAKLNFKTGVDHFCLHPGGTAMIDGV 348

Query: 903  GKSLGLSEHDLEPARMTLHRFGNTS 977
             KSL LSE D+EPARMTLHRFGNTS
Sbjct: 349  AKSLELSESDMEPARMTLHRFGNTS 373


>ref|XP_002534162.1| acyltransferase, putative [Ricinus communis]
            gi|223525766|gb|EEF28222.1| acyltransferase, putative
            [Ricinus communis]
          Length = 475

 Score =  416 bits (1069), Expect = e-114
 Identities = 200/331 (60%), Positives = 255/331 (77%), Gaps = 6/331 (1%)
 Frame = +3

Query: 3    FCGNIIAKNKNLGPNEYRFVLKATVGSGIGEETYGPRNVLSGREESPTLLDGVFEIEECF 182
            FCG +I +NKNLG NEY+F+LKA V SGIGE+TY PR V  GREE+PT  DG+ E+EE F
Sbjct: 55   FCGELITRNKNLGLNEYKFLLKAIVSSGIGEQTYAPRMVFDGREENPTFEDGILEMEEFF 114

Query: 183  YNTLDSLFAKSGVTPSEIHVLVVNISMFTSAPSPSSWIVNHYNMKEDIKVFNLSGMGCSA 362
            +++++ L ++SG++P EI VL+VN+SM + APS SS I+N Y M+EDI+ FNL+GMGCSA
Sbjct: 115  HDSIEKLLSRSGISPQEIDVLIVNVSMLSVAPSLSSRIINRYKMREDIRSFNLTGMGCSA 174

Query: 363  TLLSINAVQNILSTHKNAFALVVSTECVGTNWYSGNDKSMMLPNCLFRSGGGAVLLTNKP 542
            +L+S+N  QNI  +HKN  ALVV++E +  NWYSGND+SM+L NCLFRSGG A+LLTNK 
Sbjct: 175  SLISVNIAQNIFKSHKNVCALVVTSESLTPNWYSGNDRSMILANCLFRSGGCAMLLTNKR 234

Query: 543  SLRRQSMLKLKCLVRTHIGANDEAYQCAMQKEDDHGRLGVRLGKNLPKAATRAFVDNLRD 722
            +L  ++M KLKCLVRTH G  DE+Y+C +QKEDD GR G  LGK+LPKAATRAFVDNLR+
Sbjct: 235  ALEHKAMFKLKCLVRTHHGGRDESYECCLQKEDDQGRPGFHLGKSLPKAATRAFVDNLRE 294

Query: 723  LAPKVLPLTELVRYAIVSFFQXXXXXXXXXXXXXXA------VINFRTGVDHFALHAGGT 884
            ++PK+LP+ EL+R++I++F +                     VIN RTGVDHF +H GG 
Sbjct: 295  ISPKILPIRELLRFSIMTFIRKWSQSRNSGKGGGATTPAPRPVINMRTGVDHFCIHTGGK 354

Query: 885  AVIDGIGKSLGLSEHDLEPARMTLHRFGNTS 977
            AVIDGIG +L LSE+DLEPARMTLHRFGNTS
Sbjct: 355  AVIDGIGVNLDLSEYDLEPARMTLHRFGNTS 385


>ref|XP_002313455.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa]
            gi|222849863|gb|EEE87410.1| beta-ketoacyl-coa synthase
            family protein [Populus trichocarpa]
          Length = 461

 Score =  412 bits (1060), Expect = e-113
 Identities = 196/326 (60%), Positives = 257/326 (78%), Gaps = 1/326 (0%)
 Frame = +3

Query: 3    FCGNIIAKNKNLGPNEYRFVLKATVGSGIGEETYGPRNVLSGREESPTLLDGVFEIEECF 182
            F G +I ++K LG NEY+F+LKA V SGIGE+TYGPR +  G+EE+PTL D V E+EE F
Sbjct: 51   FSGKVIMRSKQLGLNEYKFLLKAIVSSGIGEQTYGPRIMFKGQEENPTLQDSVSEVEEFF 110

Query: 183  YNTLDSLFAKSGVTPSEIHVLVVNISMFTSAPSPSSWIVNHYNMKEDIKVFNLSGMGCSA 362
            +++++ L A+SG++P EI VLVVN+SM +S PS ++ I+NHY ++ED+KVFNLSGMGCSA
Sbjct: 111  HDSIEKLLARSGISPREIDVLVVNVSMLSSVPSLAARIINHYKLREDVKVFNLSGMGCSA 170

Query: 363  TLLSINAVQNILSTHKNAFALVVSTECVGTNWYSGNDKSMMLPNCLFRSGGGAVLLTNKP 542
            +L+S++ VQN+  + KN +ALVV++E +  NWYSGND+SM+L NCLFRSGG A+LLTNK 
Sbjct: 171  SLISVDIVQNVFKSCKNVYALVVTSESLSPNWYSGNDRSMILANCLFRSGGCAILLTNKR 230

Query: 543  SLRRQSMLKLKCLVRTHIGANDEAYQCAMQKEDDHGRLGVRLGKNLPKAATRAFVDNLRD 722
            +L+ ++M KLKCLVRTH GA DE+Y C +Q+ED+ GRLG  LGK+LPKAATRA VDNLR+
Sbjct: 231  ALKHRAMFKLKCLVRTHHGARDESYDCCLQREDEQGRLGFHLGKSLPKAATRALVDNLRE 290

Query: 723  LAPKVLPLTELVRYAIVSFF-QXXXXXXXXXXXXXXAVINFRTGVDHFALHAGGTAVIDG 899
            + PK+LP+ EL+R+ +VSF  +               VINF+TGVDHF +H GG AVIDG
Sbjct: 291  ITPKILPVRELLRFMVVSFIRKYWSHRSTKGVVSPKPVINFKTGVDHFCIHTGGKAVIDG 350

Query: 900  IGKSLGLSEHDLEPARMTLHRFGNTS 977
            IG +L L+E+DLEPARMTLHRFGNTS
Sbjct: 351  IGVNLDLTEYDLEPARMTLHRFGNTS 376


>ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, partial [Vitis vinifera]
          Length = 556

 Score =  412 bits (1059), Expect = e-113
 Identities = 200/325 (61%), Positives = 256/325 (78%)
 Frame = +3

Query: 3    FCGNIIAKNKNLGPNEYRFVLKATVGSGIGEETYGPRNVLSGREESPTLLDGVFEIEECF 182
            FCG++I +NK+LG  EY+F+LKA V SGIGEETYGPRNV SG E  P++LDG+ E++E F
Sbjct: 137  FCGDMIRRNKSLGLQEYKFLLKAIVNSGIGEETYGPRNVFSGNETHPSVLDGISEMDEFF 196

Query: 183  YNTLDSLFAKSGVTPSEIHVLVVNISMFTSAPSPSSWIVNHYNMKEDIKVFNLSGMGCSA 362
             ++++ L  + GV+PSEI  LVVN+SM T+APS +  I+N Y M+E+IK FNL+GMGCSA
Sbjct: 197  NDSIEKLLDRVGVSPSEIDALVVNVSMITTAPSLAGRIINRYKMRENIKAFNLTGMGCSA 256

Query: 363  TLLSINAVQNILSTHKNAFALVVSTECVGTNWYSGNDKSMMLPNCLFRSGGGAVLLTNKP 542
            +L+SIN VQN+  ++KN +ALVV++E +  NWY+GND+SM+L NCLFRSGG AVLLTNK 
Sbjct: 257  SLISINIVQNLFKSYKNMYALVVTSESLSPNWYTGNDRSMILSNCLFRSGGCAVLLTNKR 316

Query: 543  SLRRQSMLKLKCLVRTHIGANDEAYQCAMQKEDDHGRLGVRLGKNLPKAATRAFVDNLRD 722
            +LR ++MLKL+CLVRTH GA DE++ C +QKEDD GRLG  L K+LPKAATRAF+DNLR 
Sbjct: 317  ALRHRAMLKLRCLVRTHHGAKDESFGCCIQKEDDQGRLGFFLNKSLPKAATRAFIDNLRV 376

Query: 723  LAPKVLPLTELVRYAIVSFFQXXXXXXXXXXXXXXAVINFRTGVDHFALHAGGTAVIDGI 902
            ++PK+LP+ EL+RY + S  +               VINF+TGVDHF +H GG AVIDGI
Sbjct: 377  ISPKILPVRELLRYMVASLVR---KMYQNSKGGGKVVINFKTGVDHFCIHTGGKAVIDGI 433

Query: 903  GKSLGLSEHDLEPARMTLHRFGNTS 977
            GKSL L+E+DLEPARMTLHRFGNTS
Sbjct: 434  GKSLELTEYDLEPARMTLHRFGNTS 458


>emb|CAN62551.1| hypothetical protein VITISV_002308 [Vitis vinifera]
          Length = 467

 Score =  412 bits (1059), Expect = e-113
 Identities = 200/325 (61%), Positives = 256/325 (78%)
 Frame = +3

Query: 3    FCGNIIAKNKNLGPNEYRFVLKATVGSGIGEETYGPRNVLSGREESPTLLDGVFEIEECF 182
            FCG++I +NK+LG  EY+F+LKA V SGIGEETYGPRNV SG E  P++LDG+ E++E F
Sbjct: 51   FCGDMIRRNKSLGLQEYKFLLKAIVNSGIGEETYGPRNVFSGNETHPSVLDGISEMDEFF 110

Query: 183  YNTLDSLFAKSGVTPSEIHVLVVNISMFTSAPSPSSWIVNHYNMKEDIKVFNLSGMGCSA 362
             ++++ L  + GV+PSEI  LVVN+SM T+APS +  I+N Y M+E+IK FNL+GMGCSA
Sbjct: 111  NDSIEKLLDRVGVSPSEIDALVVNVSMITTAPSLAGRIINRYKMRENIKAFNLTGMGCSA 170

Query: 363  TLLSINAVQNILSTHKNAFALVVSTECVGTNWYSGNDKSMMLPNCLFRSGGGAVLLTNKP 542
            +L+SIN VQN+  ++KN +ALVV++E +  NWY+GND+SM+L NCLFRSGG AVLLTNK 
Sbjct: 171  SLISINIVQNLFKSYKNMYALVVTSESLSPNWYTGNDRSMILSNCLFRSGGCAVLLTNKR 230

Query: 543  SLRRQSMLKLKCLVRTHIGANDEAYQCAMQKEDDHGRLGVRLGKNLPKAATRAFVDNLRD 722
            +LR ++MLKL+CLVRTH GA DE++ C +QKEDD GRLG  L K+LPKAATRAF+DNLR 
Sbjct: 231  ALRHRAMLKLRCLVRTHHGAKDESFGCCIQKEDDQGRLGFFLNKSLPKAATRAFIDNLRV 290

Query: 723  LAPKVLPLTELVRYAIVSFFQXXXXXXXXXXXXXXAVINFRTGVDHFALHAGGTAVIDGI 902
            ++PK+LP+ EL+RY + S  +               VINF+TGVDHF +H GG AVIDGI
Sbjct: 291  ISPKILPVRELLRYMVASLVR---KMYQNSKGGGKVVINFKTGVDHFCIHTGGKAVIDGI 347

Query: 903  GKSLGLSEHDLEPARMTLHRFGNTS 977
            GKSL L+E+DLEPARMTLHRFGNTS
Sbjct: 348  GKSLELTEYDLEPARMTLHRFGNTS 372


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