BLASTX nr result

ID: Coptis25_contig00024039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024039
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551277.1| PREDICTED: uncharacterized protein LOC100797...    67   1e-09
tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea m...    67   2e-09
tpg|DAA40725.1| TPA: hypothetical protein ZEAMMB73_966448 [Zea m...    66   3e-09
gb|AFW68609.1| hypothetical protein ZEAMMB73_777129 [Zea mays]         66   3e-09
ref|XP_003548788.1| PREDICTED: uncharacterized protein LOC100798...    66   3e-09

>ref|XP_003551277.1| PREDICTED: uncharacterized protein LOC100797937 [Glycine max]
          Length = 604

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 5   DTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKITSTNARNRLKTWKKIVSGVQELL 184
           D LR+Q +LGNKG G WKAVAY+     +     + + + N +NR K W+     V ++L
Sbjct: 347 DVLRDQRNLGNKGDGNWKAVAYSTAAQILSKRFGVHLMADNVKNRFKLWRTWYGIVSDIL 406

Query: 185 GLSGFGWDDCKKTVTAD-ESVWTD 253
             SGF WD  K  +T + E  W +
Sbjct: 407 SQSGFDWDSTKYMITVENEIAWNE 430


>tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea mays]
          Length = 261

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   LDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKITSTNARNRLKTWKKIVSGVQEL 181
           LDT  +  + G++ Q GWK+  YTAVV NV   C + IT  N  +R KT+ K  + +  L
Sbjct: 23  LDTFVDYYNKGDRCQNGWKSHVYTAVVKNVCEKCNVTITKENISSRSKTFDKHYNIINGL 82

Query: 182 LGLSGFGWDDCKKTVTAD-ESVWTD 253
           L  SGFGWD  K  +  D ++VW +
Sbjct: 83  LSTSGFGWDWEKNKLKVDSDTVWDE 107


>tpg|DAA40725.1| TPA: hypothetical protein ZEAMMB73_966448 [Zea mays]
          Length = 206

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   LDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKITSTNARNRLKTWKKIVSGVQEL 181
           LDT  E  + G++ Q GWK+  YTA + NV   C ++IT  N  +R KT+ K  + +  +
Sbjct: 25  LDTFVEYYNKGDRCQNGWKSHVYTAAIKNVREKCNVEITKDNIMSRNKTFDKHHTIINGM 84

Query: 182 LGLSGFGWDDCKKTVTAD-ESVW 247
           L  SGFGWD  K  ++ D +SVW
Sbjct: 85  LETSGFGWDWNKNKISVDSDSVW 107


>gb|AFW68609.1| hypothetical protein ZEAMMB73_777129 [Zea mays]
          Length = 290

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   LDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKITSTNARNRLKTWKKIVSGVQEL 181
           LDT  E  + G++ Q GWK+  YTA + NV   C ++IT  N  +R KT+ K  + +  +
Sbjct: 6   LDTFVEYYNKGDRCQNGWKSHVYTAAIKNVREKCNVEITKDNIMSRNKTFDKHHTIINGM 65

Query: 182 LGLSGFGWDDCKKTVTAD-ESVW 247
           L  SGFGWD  K  ++ D +SVW
Sbjct: 66  LQTSGFGWDWNKNKISVDSDSVW 88


>ref|XP_003548788.1| PREDICTED: uncharacterized protein LOC100798063 [Glycine max]
          Length = 238

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   LDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKITSTNARNRLKTWKKIVSGVQEL 181
           +D LR+Q +LGNKG G WK VAY+     +     + + + N +NR K W+     V ++
Sbjct: 9   VDVLRDQRNLGNKGDGNWKTVAYSTATQILSKHFGVHLMADNVKNRFKLWRTWYGIVSDI 68

Query: 182 LGLSGFGWDDCKKTVTAD-ESVWTD 253
           L  SGF WD  K  +T + E  W +
Sbjct: 69  LSQSGFDWDSTKYMITVENEIAWNE 93


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