BLASTX nr result

ID: Coptis25_contig00024037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024037
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512579.1| conserved hypothetical protein [Ricinus comm...   151   1e-34
gb|AFK43948.1| unknown [Medicago truncatula]                          148   9e-34
ref|XP_002329993.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
gb|AFW71243.1| hypothetical protein ZEAMMB73_291095 [Zea mays]        145   8e-33
ref|XP_002279694.1| PREDICTED: uncharacterized protein LOC100249...   145   1e-32

>ref|XP_002512579.1| conserved hypothetical protein [Ricinus communis]
           gi|223548540|gb|EEF50031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 96

 Score =  151 bits (381), Expect = 1e-34
 Identities = 68/96 (70%), Positives = 77/96 (80%)
 Frame = -2

Query: 683 MALRRWMGFSEGELSRADCKPCSRLMRHTAGIFTFGGGMSFWILCRLHYGPRITIPRTLR 504
           MALRR+ GFS+GEL R+DCKPCSRLMR TAG+F+ GG + FWILCRLHYGPRIT+PR+LR
Sbjct: 1   MALRRFFGFSDGELMRSDCKPCSRLMRQTAGVFSVGGALGFWILCRLHYGPRITVPRSLR 60

Query: 503 WAACGXXXXXXXXXXXVRLFSPECEPQNIAAFDKGK 396
           WA CG           VRLFSPECEPQNIAAFD+ K
Sbjct: 61  WATCGAISTSSTTALLVRLFSPECEPQNIAAFDRAK 96


>gb|AFK43948.1| unknown [Medicago truncatula]
          Length = 96

 Score =  148 bits (374), Expect = 9e-34
 Identities = 66/96 (68%), Positives = 78/96 (81%)
 Frame = -2

Query: 683 MALRRWMGFSEGELSRADCKPCSRLMRHTAGIFTFGGGMSFWILCRLHYGPRITIPRTLR 504
           M+LRR++GFSEG++ R+DCKPCSRLMRHTAGIF+ GG + FW+LCR+HYGPRI IPR+LR
Sbjct: 1   MSLRRFLGFSEGDVMRSDCKPCSRLMRHTAGIFSVGGALRFWVLCRMHYGPRIQIPRSLR 60

Query: 503 WAACGXXXXXXXXXXXVRLFSPECEPQNIAAFDKGK 396
           WAACG           VRLFSPECEPQNIAA+D  K
Sbjct: 61  WAACGAVTVSSSTALPVRLFSPECEPQNIAAYDNKK 96


>ref|XP_002329993.1| predicted protein [Populus trichocarpa] gi|222871418|gb|EEF08549.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  147 bits (371), Expect = 2e-33
 Identities = 70/96 (72%), Positives = 75/96 (78%)
 Frame = -2

Query: 683 MALRRWMGFSEGELSRADCKPCSRLMRHTAGIFTFGGGMSFWILCRLHYGPRITIPRTLR 504
           MALRR  GFS+GEL R+DCKPCSRLMR TAGIF+ GG   FWILCRLHYGPRIT PR+LR
Sbjct: 1   MALRRLCGFSDGELMRSDCKPCSRLMRQTAGIFSVGGAFGFWILCRLHYGPRITNPRSLR 60

Query: 503 WAACGXXXXXXXXXXXVRLFSPECEPQNIAAFDKGK 396
           WAACG           VRLFSPECEPQNIAA+DK K
Sbjct: 61  WAACGAIAWSSTSALLVRLFSPECEPQNIAAYDKVK 96


>gb|AFW71243.1| hypothetical protein ZEAMMB73_291095 [Zea mays]
          Length = 135

 Score =  145 bits (366), Expect = 8e-33
 Identities = 67/100 (67%), Positives = 79/100 (79%)
 Frame = -2

Query: 701 RRTKILMALRRWMGFSEGELSRADCKPCSRLMRHTAGIFTFGGGMSFWILCRLHYGPRIT 522
           R   + MALRR +G+SEGE+ R + KPCSRLMR TAGIF+ GGG++FW+LCRLHYGPRIT
Sbjct: 30  RLPNLKMALRRALGWSEGEVMRPESKPCSRLMRQTAGIFSVGGGLAFWVLCRLHYGPRIT 89

Query: 521 IPRTLRWAACGXXXXXXXXXXXVRLFSPECEPQNIAAFDK 402
           +PR+LRWA+CG           VRLFSPECEPQNIAAFDK
Sbjct: 90  VPRSLRWASCGAVSMSATSALLVRLFSPECEPQNIAAFDK 129


>ref|XP_002279694.1| PREDICTED: uncharacterized protein LOC100249447 [Vitis vinifera]
           gi|296089850|emb|CBI39669.3| unnamed protein product
           [Vitis vinifera]
          Length = 96

 Score =  145 bits (365), Expect = 1e-32
 Identities = 67/96 (69%), Positives = 75/96 (78%)
 Frame = -2

Query: 683 MALRRWMGFSEGELSRADCKPCSRLMRHTAGIFTFGGGMSFWILCRLHYGPRITIPRTLR 504
           MALRR  GFS+GEL R+D KPCSRLM+ TAG+FT GGG +FWILCRLHYGPRIT+PR+LR
Sbjct: 1   MALRRLFGFSDGELMRSDAKPCSRLMKQTAGLFTVGGGFAFWILCRLHYGPRITVPRSLR 60

Query: 503 WAACGXXXXXXXXXXXVRLFSPECEPQNIAAFDKGK 396
           WAACG           VRLFSP CEPQNIAA+D  K
Sbjct: 61  WAACGAVSVSSSSALLVRLFSPACEPQNIAAYDNKK 96


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