BLASTX nr result

ID: Coptis25_contig00024020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024020
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262...   306   3e-81
emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]   305   7e-81
ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|2...   273   4e-71
ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago ...   263   3e-68
ref|XP_002515453.1| conserved hypothetical protein [Ricinus comm...   256   7e-66

>ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262872 [Vitis vinifera]
          Length = 371

 Score =  306 bits (785), Expect = 3e-81
 Identities = 148/241 (61%), Positives = 180/241 (74%), Gaps = 4/241 (1%)
 Frame = +2

Query: 197 SGNPNLATCLYNTDLGLAALTWCKNIFGRGLHIDLHFEEQEDEEXXXXXXXXXXXXX--H 370
           SGNPNLATC+Y+TDLG+  LTW +N FGR LH+ LH     +                 H
Sbjct: 39  SGNPNLATCVYHTDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFH 98

Query: 371 LHLKPFLFWRKHGVKRFDAKTS--SKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMI 544
           LH+KPF+FW+K+G K+     +   + I ++WDLT+AKF S  EPQ  FYVAVV + EMI
Sbjct: 99  LHIKPFVFWKKYGSKKLHVAGAPGGRDIRVFWDLTRAKFGSWPEPQHGFYVAVVADGEMI 158

Query: 545 LLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARVGGKVRDISIDCSVCDE 724
           LLVGD  +EAY +T+A+K E+ Q LVLRREHVFGNK+YTT+A  GGK R+ISIDCSV D+
Sbjct: 159 LLVGDSEKEAYNKTRAKKAERTQVLVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDD 218

Query: 725 PKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAVFMFRF 904
           P+LSFSVD KRVL IKRLKWKFRGNEKIEVDG+PIQVSWDV+NWLF+D  + HAVFMF+F
Sbjct: 219 PRLSFSVDRKRVLQIKRLKWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMESHAVFMFKF 278

Query: 905 E 907
           E
Sbjct: 279 E 279


>emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]
          Length = 372

 Score =  305 bits (782), Expect = 7e-81
 Identities = 147/241 (60%), Positives = 179/241 (74%), Gaps = 4/241 (1%)
 Frame = +2

Query: 197 SGNPNLATCLYNTDLGLAALTWCKNIFGRGLHIDLHFEEQEDEEXXXXXXXXXXXXX--H 370
           SGNPNLATC+Y+TDLG+  LTW +N FGR LH+ LH     +                 H
Sbjct: 39  SGNPNLATCVYHTDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFH 98

Query: 371 LHLKPFLFWRKHGVKRFDAKTS--SKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMI 544
           LH+KPF+FW+K+G K+     +   + I ++WDLT+AKF S  EPQ  FYV VV + EMI
Sbjct: 99  LHIKPFVFWKKYGSKKLHVAGAPGGRDIRVFWDLTRAKFGSXPEPQHGFYVXVVADGEMI 158

Query: 545 LLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARVGGKVRDISIDCSVCDE 724
           LLVGD  +EAY +T+A+K E+ Q LVLRREHVFGNK+YTT+A  GGK R+ISIDCSV D+
Sbjct: 159 LLVGDSEKEAYNKTRAKKAERTQVLVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDD 218

Query: 725 PKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAVFMFRF 904
           P+LSFSVD KRVL IKRLKWKFRGNEKIEVDG+PIQVSWDV+NWLF+D  + HAVFMF+F
Sbjct: 219 PRLSFSVDRKRVLQIKRLKWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMESHAVFMFKF 278

Query: 905 E 907
           E
Sbjct: 279 E 279


>ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|222865752|gb|EEF02883.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  273 bits (698), Expect = 4e-71
 Identities = 135/240 (56%), Positives = 174/240 (72%), Gaps = 9/240 (3%)
 Frame = +2

Query: 209 NLATCLYNTDLGLAALTWCKNIFGRGLHIDLHFEEQE----DEEXXXXXXXXXXXXXHLH 376
           NL TCLY TDLGL +LTW  ++ G  LH+ LH  +                      HL+
Sbjct: 1   NLTTCLYQTDLGLFSLTWSSSLLGHSLHLRLHPIDDNASYCSPVSLSNPLSLSTISFHLN 60

Query: 377 LKPFLFWRKHGVKRF-----DAKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEM 541
           +KPFLFW++HG K+      +  T +  I+I+WDL++A+F S  EPQS FY+AVVV  E+
Sbjct: 61  IKPFLFWKRHGSKKLHVINQEPDTPTPRIQIFWDLSRARFGSGPEPQSRFYIAVVVEREV 120

Query: 542 ILLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARVGGKVRDISIDCSVCD 721
           +L+VGDL++EA+ +TKA K E+ Q LVLRREHVFGN++YTT+AR GG+ R ISIDCSV +
Sbjct: 121 VLVVGDLTKEAFAKTKALKQERPQVLVLRREHVFGNRVYTTRARFGGRNRVISIDCSVNN 180

Query: 722 EPKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAVFMFR 901
           + +L FSVD+KRVL IKRLKWKFRGNE+IEVDGVPIQVSWDV+NWLF+  ++ HAVFMFR
Sbjct: 181 DARLCFSVDNKRVLQIKRLKWKFRGNERIEVDGVPIQVSWDVYNWLFDGINNDHAVFMFR 240


>ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago truncatula]
           gi|355492363|gb|AES73566.1| hypothetical protein
           MTR_3g106250 [Medicago truncatula]
          Length = 346

 Score =  263 bits (673), Expect = 3e-68
 Identities = 124/239 (51%), Positives = 171/239 (71%), Gaps = 2/239 (0%)
 Frame = +2

Query: 197 SGNPNLATCLYNTDLGLAALTWCKNIFGRGLHIDLHFEEQEDEEXXXXXXXXXXXXXHLH 376
           S NPNL T LY +++GL +LTW ++I GR LH+ LH    +                HLH
Sbjct: 32  STNPNLTTYLYQSNVGLVSLTWSRSILGRSLHVQLHHHPFDSPPTNPSSSSSSF---HLH 88

Query: 377 LKPFLFWRKHGVKRFDAKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMILLVG 556
           +KPF+FW+KHG K+  + T      ++W+L+KAKF S  EP S FY AVVV++EM LLVG
Sbjct: 89  IKPFIFWKKHGTKKLSSNT-----HLFWNLSKAKFGSGPEPDSGFYFAVVVDNEMTLLVG 143

Query: 557 DLSEEAYERTKARKLEK-IQSLVLRREHVFGNKLYTTKARVGGKVRDISIDCSVCDEPKL 733
           D +++AY ++K+++ +   Q LV++REHV+ NK+Y T+AR GGK+R+I IDC   D  +L
Sbjct: 144 DSNKDAYAKSKSKEHKNNFQYLVMKREHVYANKIYNTRARFGGKMREIQIDCGGRDHSRL 203

Query: 734 SFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLF-EDTDDGHAVFMFRFE 907
            FSVD ++VL IKRLKWKFRGNE++E+DGVP+Q+SWDV+NWLF +D  DGHA+FMF+FE
Sbjct: 204 CFSVDGQKVLQIKRLKWKFRGNERVEIDGVPVQISWDVYNWLFVKDNSDGHAIFMFKFE 262


>ref|XP_002515453.1| conserved hypothetical protein [Ricinus communis]
           gi|223545397|gb|EEF46902.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 336

 Score =  256 bits (653), Expect = 7e-66
 Identities = 121/189 (64%), Positives = 155/189 (82%), Gaps = 9/189 (4%)
 Frame = +2

Query: 368 HLHLKPFLFWRKHGVKRFD---------AKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVA 520
           HL +KP++FW+KHG K+           +  S+ +I+I+WDL++AKF S  EPQS FY+A
Sbjct: 45  HLDIKPYIFWKKHGSKKLQIINHQDYHTSTASTPAIQIFWDLSRAKFGSGPEPQSGFYIA 104

Query: 521 VVVNSEMILLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARVGGKVRDIS 700
           VVV  E++LLVGD +++A+ +T+ARK E+ Q LVLRREHV+GN+++TTKAR GGK RDIS
Sbjct: 105 VVVEREIVLLVGDSTKQAFAKTRARKQERNQVLVLRREHVYGNRVFTTKARFGGKNRDIS 164

Query: 701 IDCSVCDEPKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDG 880
           IDC+V  + +LSFSVD+KRVL IK+LKWKFRGNEKIEVDGVPIQVSWDV+NWLFED ++G
Sbjct: 165 IDCTVNGDARLSFSVDNKRVLHIKQLKWKFRGNEKIEVDGVPIQVSWDVYNWLFEDINNG 224

Query: 881 HAVFMFRFE 907
           HAVFMFRFE
Sbjct: 225 HAVFMFRFE 233


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