BLASTX nr result

ID: Coptis25_contig00024011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024011
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327445.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002331051.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002517678.1| hypothetical protein RCOM_0901460 [Ricinus c...    61   8e-08
ref|XP_002531443.1| serine-threonine protein kinase, plant-type,...    60   1e-07
ref|XP_002333926.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002327445.1| predicted protein [Populus trichocarpa] gi|222835999|gb|EEE74420.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/62 (46%), Positives = 45/62 (72%)
 Frame = -2

Query: 200 CCTWESVKCSNSTGRVTQLSLQEAYPYNFDVDNHFLNVSLYTPFEELQHLDLSGNYVNWE 21
           CC+WE ++CS+STGRVT+L L+E    N ++ + +LN SL+ PF++L+ L LSGN +   
Sbjct: 58  CCSWERIECSSSTGRVTELYLEET--RNEELGDWYLNTSLFLPFQQLEALYLSGNRIAGW 115

Query: 20  IE 15
           +E
Sbjct: 116 VE 117


>ref|XP_002331051.1| predicted protein [Populus trichocarpa] gi|222872981|gb|EEF10112.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/57 (49%), Positives = 40/57 (70%)
 Frame = -2

Query: 200 CCTWESVKCSNSTGRVTQLSLQEAYPYNFDVDNHFLNVSLYTPFEELQHLDLSGNYV 30
           CC+W+ V C+ +TGRV QL L         + + +LNVSL+ PF+ELQ+LDLSGN++
Sbjct: 44  CCSWKGVDCNFTTGRVVQLDLSSKREEG--LGDLYLNVSLFRPFQELQYLDLSGNFI 98


>ref|XP_002517678.1| hypothetical protein RCOM_0901460 [Ricinus communis]
           gi|223543310|gb|EEF44842.1| hypothetical protein
           RCOM_0901460 [Ricinus communis]
          Length = 135

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
 Frame = -2

Query: 200 CCTWESVKCSNSTGRVTQLSLQEA--YPYNFDVDNH---FLNVSLYTPFEELQHLDLSGN 36
           CC W  VKC+++TGRV +LSL       YN  ++     F+N+SL+ PFEEL++LDLS N
Sbjct: 62  CCNWVRVKCNSTTGRVVELSLNNTSLLEYNQILEKQELWFVNMSLFLPFEELRYLDLSKN 121

Query: 35  YVNWEIED 12
           + +  +ED
Sbjct: 122 WFSGCLED 129


>ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223528936|gb|EEF30930.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 912

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = -2

Query: 200 CCTWESVKCSNSTGRVTQLSLQEAYPYNFDVDNHFLNVSLYTPFEELQHLDLSGNYV 30
           CC WE V+CS+ TGRVT+L L     Y     N +LN SL+ PFEEL+ L L GN +
Sbjct: 56  CCQWERVECSSITGRVTRLDLDTTRAYQ-SSRNWYLNASLFLPFEELKSLSLKGNSI 111


>ref|XP_002333926.1| predicted protein [Populus trichocarpa] gi|222838974|gb|EEE77325.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/57 (49%), Positives = 38/57 (66%)
 Frame = -2

Query: 200 CCTWESVKCSNSTGRVTQLSLQEAYPYNFDVDNHFLNVSLYTPFEELQHLDLSGNYV 30
           CCTWE V C+ +TGRV +L L         + + +LNVSL+ PF+ELQ L LSGN++
Sbjct: 32  CCTWEGVDCNFTTGRVVELHLSSIREEG--LGDLYLNVSLFRPFQELQSLGLSGNFI 86


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