BLASTX nr result

ID: Coptis25_contig00024008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024008
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270749.1| PREDICTED: tankyrase-2-like [Vitis vinifera]      173   2e-41
emb|CAN75193.1| hypothetical protein VITISV_016148 [Vitis vinifera]   172   3e-41
ref|XP_002301558.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002520713.1| ankyrin repeat-containing protein, putative ...   139   4e-31
ref|XP_003518941.1| PREDICTED: ankyrin-1-like [Glycine max]           134   9e-30

>ref|XP_002270749.1| PREDICTED: tankyrase-2-like [Vitis vinifera]
          Length = 472

 Score =  173 bits (438), Expect = 2e-41
 Identities = 90/166 (54%), Positives = 114/166 (68%)
 Frame = +3

Query: 105 MDRLVTVDVQELQIHFKRNKPCTASIKLTNLMHTMSVAVXXXXXXXXXXXXXQPYXXXXX 284
           MDRLV  DV+E++I FKR + C  + +LTNLMHTMSVAV             QP+     
Sbjct: 1   MDRLVKPDVKEVEIIFKRGQKCNTTFRLTNLMHTMSVAVSLTTTNPSLFSFPQPFSILPP 60

Query: 285 XXXXXFYVQLSQPSEHPPLCHPSTSLLVRTSMLPTGKAHQEDLKRLFTRPGPHIFKDATI 464
                  + LSQPS+HPPL  P+ +LLVRT+MLPTGKAH +DL+RLF++PGPH+FKDA I
Sbjct: 61  LSSSPITLLLSQPSDHPPLSSPNDTLLVRTAMLPTGKAHLDDLRRLFSKPGPHVFKDAAI 120

Query: 465 PITFVGVHVVEFLLSPNCSRQFKTLEISFLVSKAIYGCTQLEISSL 602
           PI  VG HVV+FLL P+     KTLEI+FL+SKAI GC   +++SL
Sbjct: 121 PIFLVGPHVVDFLLLPHP----KTLEIAFLLSKAISGCNGSQLTSL 162


>emb|CAN75193.1| hypothetical protein VITISV_016148 [Vitis vinifera]
          Length = 472

 Score =  172 bits (437), Expect = 3e-41
 Identities = 90/166 (54%), Positives = 114/166 (68%)
 Frame = +3

Query: 105 MDRLVTVDVQELQIHFKRNKPCTASIKLTNLMHTMSVAVXXXXXXXXXXXXXQPYXXXXX 284
           MDRLV  DV+E++I FKR + C  + +LTNLMHTMSVAV             QP+     
Sbjct: 1   MDRLVKPDVKEVEIIFKRGQKCNTTFRLTNLMHTMSVAVSLTTTNPSLFSFPQPFSILPP 60

Query: 285 XXXXXFYVQLSQPSEHPPLCHPSTSLLVRTSMLPTGKAHQEDLKRLFTRPGPHIFKDATI 464
                  + LSQPS+HPPL  P+ +LLVRT+MLPTGKAH +DL+RLF++PGPH+FKDA I
Sbjct: 61  LSSSPXTLLLSQPSDHPPLSSPNDTLLVRTAMLPTGKAHLDDLRRLFSKPGPHVFKDAAI 120

Query: 465 PITFVGVHVVEFLLSPNCSRQFKTLEISFLVSKAIYGCTQLEISSL 602
           PI  VG HVV+FLL P+     KTLEI+FL+SKAI GC   +++SL
Sbjct: 121 PIFLVGPHVVDFLLLPHP----KTLEIAFLLSKAISGCNGSQLTSL 162


>ref|XP_002301558.1| predicted protein [Populus trichocarpa] gi|222843284|gb|EEE80831.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  139 bits (351), Expect = 3e-31
 Identities = 71/166 (42%), Positives = 105/166 (63%)
 Frame = +3

Query: 105 MDRLVTVDVQELQIHFKRNKPCTASIKLTNLMHTMSVAVXXXXXXXXXXXXXQPYXXXXX 284
           MDRLV  DV+E++I +K ++ C+ + +LTNLMHTMSVA+             QP+     
Sbjct: 1   MDRLVKADVKEVEIAYKGSQNCSTTFRLTNLMHTMSVAISLSTTNPSAFSFAQPFSIIPP 60

Query: 285 XXXXXFYVQLSQPSEHPPLCHPSTSLLVRTSMLPTGKAHQEDLKRLFTRPGPHIFKDATI 464
                + + LSQ SE PPL  P  ++ V++SMLPTGKAHQ++L+RLF++PGPHIF+DATI
Sbjct: 61  LSSSSYTIVLSQLSEQPPLSTPPDAISVKSSMLPTGKAHQDELRRLFSKPGPHIFRDATI 120

Query: 465 PITFVGVHVVEFLLSPNCSRQFKTLEISFLVSKAIYGCTQLEISSL 602
           P+  VG  V E+++    S   +  ++S   ++AI  CT  +I+ L
Sbjct: 121 PVYLVGPQVAEYII----SNHTQITDVSGYFNRAICRCTGSQITGL 162


>ref|XP_002520713.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223540098|gb|EEF41675.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 484

 Score =  139 bits (350), Expect = 4e-31
 Identities = 72/167 (43%), Positives = 107/167 (64%), Gaps = 1/167 (0%)
 Frame = +3

Query: 105 MDRLVTVDVQELQIHFKRNKPCTASIKLTNLMHTMSVAVXXXXXXXXXXXXXQPYXXXXX 284
           MDRLV  DV+E++I FK+ + CTA+ +L+NLMHTMSVAV             Q +     
Sbjct: 1   MDRLVKADVKEIEISFKKGQKCTATFRLSNLMHTMSVAVSLATTSPSFFTFNQSFSIIPP 60

Query: 285 XXXXXFYVQLSQPSEH-PPLCHPSTSLLVRTSMLPTGKAHQEDLKRLFTRPGPHIFKDAT 461
                + + LSQPS+  PP   P   + V ++MLPTGKAH +DL+RLF+RPGPHIFKDA 
Sbjct: 61  LSTSSYTLILSQPSDQSPPFRTPPHVITVISAMLPTGKAHVDDLRRLFSRPGPHIFKDAA 120

Query: 462 IPITFVGVHVVEFLLSPNCSRQFKTLEISFLVSKAIYGCTQLEISSL 602
           IPI+ VG H+ +++++ +   QF++  +    ++AI GCT  ++++L
Sbjct: 121 IPISLVGPHIADYIIARHA--QFQSSNLCSYFNRAISGCTGSQLTTL 165


>ref|XP_003518941.1| PREDICTED: ankyrin-1-like [Glycine max]
          Length = 455

 Score =  134 bits (338), Expect = 9e-30
 Identities = 69/166 (41%), Positives = 101/166 (60%)
 Frame = +3

Query: 105 MDRLVTVDVQELQIHFKRNKPCTASIKLTNLMHTMSVAVXXXXXXXXXXXXXQPYXXXXX 284
           MDRLV  D +E+++ F + + C++S KLTNLMHTMSVAV             +P+     
Sbjct: 1   MDRLVKADTKEVEMIFLKGQKCSSSFKLTNLMHTMSVAVSLTTTNSSLFSINKPFSTIPP 60

Query: 285 XXXXXFYVQLSQPSEHPPLCHPSTSLLVRTSMLPTGKAHQEDLKRLFTRPGPHIFKDATI 464
                + +QLSQPS+ PPL  P  ++ VR +MLPTGKA   DL+R F++PGPH+F+DA +
Sbjct: 61  LSTASYKLQLSQPSDQPPLSDPPDAITVRATMLPTGKATAADLRRFFSKPGPHVFRDAVL 120

Query: 465 PITFVGVHVVEFLLSPNCSRQFKTLEISFLVSKAIYGCTQLEISSL 602
            ++ VG HV EFL+S       +T +   L +K+I  CT+ ++  L
Sbjct: 121 TVSLVGPHVAEFLIS-------QTPQSRNLFAKSISACTKPQLMRL 159


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