BLASTX nr result

ID: Coptis25_contig00023994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023994
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15004.3| unnamed protein product [Vitis vinifera]              166   3e-39
ref|XP_002318079.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
ref|XP_002322174.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_002511375.1| conserved hypothetical protein [Ricinus comm...   150   2e-34
ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257...   149   5e-34

>emb|CBI15004.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  166 bits (420), Expect = 3e-39
 Identities = 82/139 (58%), Positives = 98/139 (70%), Gaps = 2/139 (1%)
 Frame = -3

Query: 412 EMGLNRFSRVLLLLGVLIFFSFKAYCDGSDVSVRFLKTPLEISRLSTATFEFEVFESGNI 233
           EMGL+R+S V+LL  V +    ++ CDGS+VSV FL  PL  SRL++ATF FEV   GN 
Sbjct: 328 EMGLSRYSWVVLLCWVFLLLCLRSGCDGSEVSVNFLTAPLAFSRLNSATFVFEVLVGGNN 387

Query: 232 --CGNCSLTCKLDDHVSPSCEARKLSYMDLHDGDHSFEVCINDFQGAGCASYNWTVDTVP 59
             C +C   CKLD+     C+A+K+SY  L DG+H+FEVC N  QG GCASY WTVDTVP
Sbjct: 388 DPCNDCIFNCKLDNGTPSDCQAKKVSYTGLLDGNHTFEVCTNGSQGVGCASYGWTVDTVP 447

Query: 58  PTAYVTAERSFTNALNISV 2
           PTAYVTA  SFTNALN SV
Sbjct: 448 PTAYVTASTSFTNALNFSV 466


>ref|XP_002318079.1| predicted protein [Populus trichocarpa] gi|222858752|gb|EEE96299.1|
           predicted protein [Populus trichocarpa]
          Length = 1083

 Score =  164 bits (414), Expect = 1e-38
 Identities = 77/138 (55%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
 Frame = -3

Query: 409 MGLNRFSRVLLLLGVLIFFSFKAYCDGSDVSVRFLKTPLEISRLSTATFEFEVFESGNI- 233
           MG  + S ++LL   L+F  F+A C+ ++V V+FLK P   S L+ ATFEF+V   G++ 
Sbjct: 1   MGRPKLSWLVLLCWALLFLCFRALCEDAEVFVKFLKAPHAFSHLNIATFEFQVLVGGDVN 60

Query: 232 -CGNCSLTCKLDDHVSPSCEARKLSYMDLHDGDHSFEVCINDFQGAGCASYNWTVDTVPP 56
            C NCS +CKLD      C A K+SY  L DG+H+FEVCIN  QGAGCA+YNWTVDT+PP
Sbjct: 61  SCTNCSFSCKLDSGSESDCGATKVSYQGLQDGNHTFEVCINGSQGAGCATYNWTVDTIPP 120

Query: 55  TAYVTAERSFTNALNISV 2
           TAY+TA +SFTNALN+SV
Sbjct: 121 TAYITASKSFTNALNVSV 138


>ref|XP_002322174.1| predicted protein [Populus trichocarpa] gi|222869170|gb|EEF06301.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  152 bits (384), Expect = 4e-35
 Identities = 74/138 (53%), Positives = 95/138 (68%), Gaps = 2/138 (1%)
 Frame = -3

Query: 409 MGLNRFSRVLLLLGVLIFFSFKAYCDGSDVSVRFLKTPLEISRLSTATFEFEVFESGNI- 233
           MG  + S +++L  VL F  F+A  D ++ SV FLK P   S L+ ATFEF+V   G++ 
Sbjct: 1   MGWPKLSWLVVLCWVLSFPCFRALGDDAEASVNFLKAPHAFSHLNIATFEFQVLVGGHVN 60

Query: 232 -CGNCSLTCKLDDHVSPSCEARKLSYMDLHDGDHSFEVCINDFQGAGCASYNWTVDTVPP 56
            C NCS++CKLD      C A K+SY  L DG+H+FEVCIN  Q  GCA+YNWTVDT+PP
Sbjct: 61  SCTNCSISCKLDSGPESDCGASKISYQGLQDGNHTFEVCINGSQRVGCATYNWTVDTIPP 120

Query: 55  TAYVTAERSFTNALNISV 2
           TAY+TA + FTNALN+SV
Sbjct: 121 TAYITASKLFTNALNVSV 138


>ref|XP_002511375.1| conserved hypothetical protein [Ricinus communis]
           gi|223550490|gb|EEF51977.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1087

 Score =  150 bits (379), Expect = 2e-34
 Identities = 75/138 (54%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = -3

Query: 409 MGLNRFSRVLLLLGVLIFFSFKAYCDGSDVSVRFLKTPLEISRLSTATFEFEVFESGN-- 236
           MGL + S ++LL  V     F+A C  +++SV+FLK P   S L+TA F FEV   GN  
Sbjct: 1   MGLLKLSWLVLLCWVFSPLFFRALCYDTEISVKFLKAPHAFSHLNTAKFVFEVLVGGNEN 60

Query: 235 ICGNCSLTCKLDDHVSPSCEARKLSYMDLHDGDHSFEVCINDFQGAGCASYNWTVDTVPP 56
            C NCS++CKLDD  +  C  R++ Y DL DG+H+FEVC N  QG GCA+Y WTVDTVPP
Sbjct: 61  SCPNCSISCKLDDGNASDCGTREVLYTDLQDGNHTFEVCNNGSQGFGCATYKWTVDTVPP 120

Query: 55  TAYVTAERSFTNALNISV 2
           TAY+TA  SFTNA N+SV
Sbjct: 121 TAYITASTSFTNARNVSV 138


>ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257111 [Vitis vinifera]
          Length = 1087

 Score =  149 bits (375), Expect = 5e-34
 Identities = 72/114 (63%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
 Frame = -3

Query: 337 CDGSDVSVRFLKTPLEISRLSTATFEFEVFESGNI--CGNCSLTCKLDDHVSPSCEARKL 164
           CDGS+VSV FL  PL  SRL++ATF FEV   GN   C +C   CKLD+     C+A+K+
Sbjct: 8   CDGSEVSVNFLTAPLAFSRLNSATFVFEVLVGGNNDPCNDCIFNCKLDNGTPSDCQAKKV 67

Query: 163 SYMDLHDGDHSFEVCINDFQGAGCASYNWTVDTVPPTAYVTAERSFTNALNISV 2
           SY  L DG+H+FEVC N  QG GCASY WTVDTVPPTAYVTA  SFTNALN SV
Sbjct: 68  SYTGLLDGNHTFEVCTNGSQGVGCASYGWTVDTVPPTAYVTASTSFTNALNFSV 121


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