BLASTX nr result

ID: Coptis25_contig00023977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023977
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67908.1| hypothetical protein VITISV_002704 [Vitis vinifera]   329   6e-88
ref|XP_002266060.1| PREDICTED: COP9 signalosome complex subunit ...   328   8e-88
gb|ACU14312.1| unknown [Glycine max]                                  318   8e-85
ref|NP_001235860.1| uncharacterized protein LOC100500543 [Glycin...   313   4e-83
gb|AFK45177.1| unknown [Lotus japonicus]                              308   1e-81

>emb|CAN67908.1| hypothetical protein VITISV_002704 [Vitis vinifera]
          Length = 197

 Score =  329 bits (843), Expect = 6e-88
 Identities = 151/197 (76%), Positives = 175/197 (88%)
 Frame = +3

Query: 36  MDFTPLKSALESKAYQNIADICDELMLKVSAQGVEFQDEWPYTIHILGHIYVNDVNSARF 215
           MDFTP+K A+ SK+Y  IADICD+LML+VS QG+ F+DEWPYTIH+LGHIYV+D+NSARF
Sbjct: 1   MDFTPIKDAMTSKSYGKIADICDDLMLQVSTQGIAFEDEWPYTIHLLGHIYVDDINSARF 60

Query: 216 LWKTIPPVVKDNQPEVAAAWKIGQELWVRNYAGVHEAIRGFNWTSEVKGLVTAFSELYTK 395
           LWK+IPP +K+ QPEV AAWKIGQ LW R+YA VHEAIRGF W+ E + +V AFSELYTK
Sbjct: 61  LWKSIPPAIKERQPEVGAAWKIGQRLWTRDYAAVHEAIRGFEWSPEAQCIVAAFSELYTK 120

Query: 396 KMFQLLLSGYSTISVGDTALFLGMNEEDASNYALQRGWTVDSVSRMLTVKKQPIVTEQKL 575
           KMFQLLLS YSTIS+ DTALFLGM+E+D +NY +++GWTVDS SRMLTVKKQPIVTEQKL
Sbjct: 121 KMFQLLLSAYSTISIQDTALFLGMSEDDVTNYVVEQGWTVDSASRMLTVKKQPIVTEQKL 180

Query: 576 DPSKLQRLTEYVFHLEH 626
           DPSKLQRLTEYVFHLEH
Sbjct: 181 DPSKLQRLTEYVFHLEH 197


>ref|XP_002266060.1| PREDICTED: COP9 signalosome complex subunit 8 [Vitis vinifera]
           gi|296081479|emb|CBI20002.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  328 bits (842), Expect = 8e-88
 Identities = 150/197 (76%), Positives = 175/197 (88%)
 Frame = +3

Query: 36  MDFTPLKSALESKAYQNIADICDELMLKVSAQGVEFQDEWPYTIHILGHIYVNDVNSARF 215
           MDFTP+K A+ SK+Y  IAD+CD+LML+VS QG+ F+DEWPYTIH+LGHIYV+D+NSARF
Sbjct: 1   MDFTPIKDAMTSKSYGKIADVCDDLMLQVSTQGIAFEDEWPYTIHLLGHIYVDDINSARF 60

Query: 216 LWKTIPPVVKDNQPEVAAAWKIGQELWVRNYAGVHEAIRGFNWTSEVKGLVTAFSELYTK 395
           LWK+IPP +K+ QPEV AAWKIGQ LW R+YA VHEAIRGF W+ E + +V AFSELYTK
Sbjct: 61  LWKSIPPAIKERQPEVGAAWKIGQRLWTRDYAAVHEAIRGFEWSPEAQCIVAAFSELYTK 120

Query: 396 KMFQLLLSGYSTISVGDTALFLGMNEEDASNYALQRGWTVDSVSRMLTVKKQPIVTEQKL 575
           KMFQLLLS YSTIS+ DTALFLGM+E+D +NY +++GWTVDS SRMLTVKKQPIVTEQKL
Sbjct: 121 KMFQLLLSAYSTISIQDTALFLGMSEDDVTNYVVEQGWTVDSASRMLTVKKQPIVTEQKL 180

Query: 576 DPSKLQRLTEYVFHLEH 626
           DPSKLQRLTEYVFHLEH
Sbjct: 181 DPSKLQRLTEYVFHLEH 197


>gb|ACU14312.1| unknown [Glycine max]
          Length = 197

 Score =  318 bits (816), Expect = 8e-85
 Identities = 143/197 (72%), Positives = 177/197 (89%)
 Frame = +3

Query: 36  MDFTPLKSALESKAYQNIADICDELMLKVSAQGVEFQDEWPYTIHILGHIYVNDVNSARF 215
           MDF+ +++AL+SK+Y  +AD+CD LML+V+A+G+ +QD+WPYTIH+L HIYV+D+NSARF
Sbjct: 1   MDFSSVRAALDSKSYDKVADVCDNLMLQVAAEGIAYQDDWPYTIHLLSHIYVHDINSARF 60

Query: 216 LWKTIPPVVKDNQPEVAAAWKIGQELWVRNYAGVHEAIRGFNWTSEVKGLVTAFSELYTK 395
           LWK+IP  +K++QPEV A WKIGQ+LW+R+YAGVHE IRGF+WT E++ LV AFSELYTK
Sbjct: 61  LWKSIPSSIKESQPEVTAVWKIGQKLWLRDYAGVHETIRGFDWTQELQTLVAAFSELYTK 120

Query: 396 KMFQLLLSGYSTISVGDTALFLGMNEEDASNYALQRGWTVDSVSRMLTVKKQPIVTEQKL 575
           +MFQLLLS YSTIS+ DTALFLGMNE+DA+NY LQ+GWTVD  S+ML VKKQP+VTEQKL
Sbjct: 121 EMFQLLLSAYSTISIKDTALFLGMNEDDATNYVLQQGWTVDPASQMLIVKKQPVVTEQKL 180

Query: 576 DPSKLQRLTEYVFHLEH 626
           DPSKLQRLTEYVFHLEH
Sbjct: 181 DPSKLQRLTEYVFHLEH 197


>ref|NP_001235860.1| uncharacterized protein LOC100500543 [Glycine max]
           gi|255630595|gb|ACU15657.1| unknown [Glycine max]
          Length = 197

 Score =  313 bits (802), Expect = 4e-83
 Identities = 141/197 (71%), Positives = 174/197 (88%)
 Frame = +3

Query: 36  MDFTPLKSALESKAYQNIADICDELMLKVSAQGVEFQDEWPYTIHILGHIYVNDVNSARF 215
           MDF+ +++AL+SK+Y  IAD+CD LML+V+A G+ +QD+WPY  H+L HIYV+D+NSARF
Sbjct: 1   MDFSSVRAALDSKSYDKIADVCDNLMLQVAADGIAYQDDWPYAAHLLSHIYVHDINSARF 60

Query: 216 LWKTIPPVVKDNQPEVAAAWKIGQELWVRNYAGVHEAIRGFNWTSEVKGLVTAFSELYTK 395
           LWK+IP  +K++QPEV A WKIGQ+LW+R+YAGVHEAIR F+WT E++ LV +F+ELYTK
Sbjct: 61  LWKSIPSSIKESQPEVTAVWKIGQKLWLRDYAGVHEAIRAFDWTQELQALVASFAELYTK 120

Query: 396 KMFQLLLSGYSTISVGDTALFLGMNEEDASNYALQRGWTVDSVSRMLTVKKQPIVTEQKL 575
           +MFQLLLS YSTIS+ DTALFLGMNE+DA+NY LQ+GWTVD  SRML VKKQP+VTEQKL
Sbjct: 121 EMFQLLLSAYSTISIKDTALFLGMNEDDATNYLLQQGWTVDPASRMLIVKKQPVVTEQKL 180

Query: 576 DPSKLQRLTEYVFHLEH 626
           DPSKLQRLTEYVFHLEH
Sbjct: 181 DPSKLQRLTEYVFHLEH 197


>gb|AFK45177.1| unknown [Lotus japonicus]
          Length = 197

 Score =  308 bits (788), Expect = 1e-81
 Identities = 138/197 (70%), Positives = 169/197 (85%)
 Frame = +3

Query: 36  MDFTPLKSALESKAYQNIADICDELMLKVSAQGVEFQDEWPYTIHILGHIYVNDVNSARF 215
           MD + + + L SK+Y  +ADICD LML+V+  G+ + D+WPY IH+L H YVND+NSARF
Sbjct: 1   MDLSTVTATLASKSYDKVADICDNLMLQVATDGIGYHDDWPYAIHLLSHFYVNDINSARF 60

Query: 216 LWKTIPPVVKDNQPEVAAAWKIGQELWVRNYAGVHEAIRGFNWTSEVKGLVTAFSELYTK 395
           LWK+IP  +K+N+PEV A W+IGQ+LW+R+YAGVHEAIRGF+W+ E++G V AFSELYTK
Sbjct: 61  LWKSIPSSIKENKPEVTAVWRIGQKLWLRDYAGVHEAIRGFDWSQELQGFVAAFSELYTK 120

Query: 396 KMFQLLLSGYSTISVGDTALFLGMNEEDASNYALQRGWTVDSVSRMLTVKKQPIVTEQKL 575
           +MFQLLLS YSTIS+ D ALFLGMNE+DA++Y  Q+GWTVDS SRMLTVKKQP+VTEQKL
Sbjct: 121 EMFQLLLSAYSTISIADAALFLGMNEDDATSYVQQQGWTVDSASRMLTVKKQPVVTEQKL 180

Query: 576 DPSKLQRLTEYVFHLEH 626
           DPSKLQRLTEYVFHLEH
Sbjct: 181 DPSKLQRLTEYVFHLEH 197


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