BLASTX nr result

ID: Coptis25_contig00023968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023968
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japo...    55   5e-06
gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indi...    55   5e-06
ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group] g...    55   5e-06
ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig...    55   6e-06
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]    55   6e-06

>gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -1

Query: 204 ENTRTRAIQSFKSKNIHVVRVFTGDEHVVALDSNGYVSIHTYQLTFC 64
           +  R RAIQSFK +NIHVVRV  GDEH VALD+ GYV  +T+   +C
Sbjct: 300 DELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV--YTWGRGYC 344


>gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -1

Query: 204 ENTRTRAIQSFKSKNIHVVRVFTGDEHVVALDSNGYVSIHTYQLTFC 64
           +  R RAIQSFK +NIHVVRV  GDEH VALD+ GYV  +T+   +C
Sbjct: 300 DELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV--YTWGRGYC 344


>ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
           gi|28564665|dbj|BAC57847.1| putative UVB-resistance
           protein UVR8 [Oryza sativa Japonica Group]
           gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa
           Japonica Group] gi|215678781|dbj|BAG95218.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 484

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -1

Query: 204 ENTRTRAIQSFKSKNIHVVRVFTGDEHVVALDSNGYVSIHTYQLTFC 64
           +  R RAIQSFK +NIHVVRV  GDEH VALD+ GYV  +T+   +C
Sbjct: 300 DELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV--YTWGRGYC 344


>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
           product [Vitis vinifera]
          Length = 492

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -1

Query: 195 RTRAIQSFKSKNIHVVRVFTGDEHVVALDSNGYVSIHTYQLTFC 64
           R RAIQSF+ K IHVVR+  GDEHVVALDS+G+V  +T+   +C
Sbjct: 311 RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFV--YTWGKGYC 352


>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -1

Query: 195 RTRAIQSFKSKNIHVVRVFTGDEHVVALDSNGYVSIHTYQLTFC 64
           R RAIQSF+ K IHVVR+  GDEHVVALDS+G+V  +T+   +C
Sbjct: 311 RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFV--YTWGKGYC 352


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