BLASTX nr result
ID: Coptis25_contig00023961
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00023961 (514 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus c... 66 3e-09 ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 >ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus communis] gi|223538751|gb|EEF40351.1| hypothetical protein RCOM_0607680 [Ricinus communis] Length = 1162 Score = 65.9 bits (159), Expect = 3e-09 Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 1/111 (0%) Frame = -2 Query: 489 TNTLAREINSHKKEMAARFVQPVPRTIVSDTLLNASVEVLVPNKLID*DT-IPPSLLVHH 313 TN IN+ K+++A VQ PR I + + LV KLID T + +L Sbjct: 241 TNARGHAINT-KQDIAVGCVQTEPRII-------SLHDDLVSEKLIDSVTALQTPILASQ 292 Query: 312 EQHDIGELHHMTSSASGMATGHGLEELNWQQLEQKSHTPAVLDLISLDDVP 160 Q D+ E H +TS + ++ GHGLEE+ WQQ + KS++ A +LISLD++P Sbjct: 293 IQSDLVEFHGVTSKSPSVSLGHGLEEVQWQQADGKSNSSAFPELISLDEIP 343 >ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|222857464|gb|EEE95011.1| predicted protein [Populus trichocarpa] Length = 954 Score = 63.9 bits (154), Expect = 1e-08 Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 1/103 (0%) Frame = -2 Query: 456 KKEMAARFVQPVPRTIVSDTLLNASVEVLVPNKLID*DTIP-PSLLVHHEQHDIGELHHM 280 +K+++ +VQP PRTI+ V+ KLID + P PS+L D+ + H++ Sbjct: 254 RKDISVGYVQPEPRTIIL-------VDDSASEKLIDPVSAPEPSILTSKVLSDVIQSHNV 306 Query: 279 TSSASGMATGHGLEELNWQQLEQKSHTPAVLDLISLDDVPSQS 151 T++AS GH LEEL WQQ + K+++ A+ + +S D +P S Sbjct: 307 TATASAFPIGHDLEELKWQQADWKANSFALPEFVSHDKLPPSS 349