BLASTX nr result

ID: Coptis25_contig00023953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023953
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30224.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ...   143   2e-32
ref|XP_004143297.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid ...   140   8e-32
ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_004170240.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid ...   136   2e-30

>emb|CBI30224.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score =  143 bits (360), Expect = 2e-32
 Identities = 64/93 (68%), Positives = 79/93 (84%)
 Frame = -3

Query: 281 QGELVYMVYRAMTYGLSPFLYLHLQWRRFKGLEHPLRWPERLGRPSLPRPPASLIYFHAV 102
           +G+L+Y VYRA+TYGLSPFLYLHL++R  +G+EHP+RWPERLGRPS PRPP  LI+FH  
Sbjct: 5   KGKLLYNVYRALTYGLSPFLYLHLRFRTLQGIEHPVRWPERLGRPSTPRPPGHLIWFHTA 64

Query: 101 SLGETMAAIPLINHCIKQQPDFNILMTTTTTSA 3
           SLGE MAAIP+I  CI+++PD  ILMT+TT SA
Sbjct: 65  SLGEGMAAIPVIKRCIEERPDCTILMTSTTASA 97


>ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase [Vitis
           vinifera]
          Length = 441

 Score =  143 bits (360), Expect = 2e-32
 Identities = 64/93 (68%), Positives = 79/93 (84%)
 Frame = -3

Query: 281 QGELVYMVYRAMTYGLSPFLYLHLQWRRFKGLEHPLRWPERLGRPSLPRPPASLIYFHAV 102
           +G+L+Y VYRA+TYGLSPFLYLHL++R  +G+EHP+RWPERLGRPS PRPP  LI+FH  
Sbjct: 5   KGKLLYNVYRALTYGLSPFLYLHLRFRTLQGIEHPVRWPERLGRPSTPRPPGHLIWFHTA 64

Query: 101 SLGETMAAIPLINHCIKQQPDFNILMTTTTTSA 3
           SLGE MAAIP+I  CI+++PD  ILMT+TT SA
Sbjct: 65  SLGEGMAAIPVIKRCIEERPDCTILMTSTTASA 97


>ref|XP_004143297.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid transferase-like
           [Cucumis sativus]
          Length = 442

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/96 (65%), Positives = 78/96 (81%)
 Frame = -3

Query: 290 ARRQGELVYMVYRAMTYGLSPFLYLHLQWRRFKGLEHPLRWPERLGRPSLPRPPASLIYF 111
           A  +G+L+Y VYRA++YGLSP LYLHL+WR  +GLEHP RWPERLGRPS  RPP  L++F
Sbjct: 2   AATKGKLIYKVYRALSYGLSPLLYLHLRWRVLRGLEHPFRWPERLGRPSHARPPGPLLWF 61

Query: 110 HAVSLGETMAAIPLINHCIKQQPDFNILMTTTTTSA 3
           HAVSLGE +A IP+I  CI+++PD  +LMTTTT SA
Sbjct: 62  HAVSLGEGLATIPIIKQCIQRRPDLVVLMTTTTYSA 97


>ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|222867530|gb|EEF04661.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/99 (64%), Positives = 78/99 (78%)
 Frame = -3

Query: 299 MARARRQGELVYMVYRAMTYGLSPFLYLHLQWRRFKGLEHPLRWPERLGRPSLPRPPASL 120
           M    R+G LVY +YRA++Y +SP L LHL+WR+ +GLEHP R PERLGRPSL RPP  L
Sbjct: 1   MGVVARKGMLVYKIYRALSYVVSPLLQLHLRWRKIRGLEHPTRLPERLGRPSLTRPPGPL 60

Query: 119 IYFHAVSLGETMAAIPLINHCIKQQPDFNILMTTTTTSA 3
           ++FHAVSLGE MAAIP+I  C+K +PD NIL+TTTT SA
Sbjct: 61  LWFHAVSLGEGMAAIPVIKECVKWRPDLNILLTTTTMSA 99


>ref|XP_004170240.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid transferase-like,
           partial [Cucumis sativus]
          Length = 290

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/96 (64%), Positives = 78/96 (81%)
 Frame = -3

Query: 290 ARRQGELVYMVYRAMTYGLSPFLYLHLQWRRFKGLEHPLRWPERLGRPSLPRPPASLIYF 111
           A  +G+L+Y +YRA++YGLSP LYLHL+WR  +GLEHP RWPERLGRPS  RPP  L++F
Sbjct: 2   AATKGKLIY-IYRALSYGLSPLLYLHLRWRVLRGLEHPFRWPERLGRPSHARPPGPLLWF 60

Query: 110 HAVSLGETMAAIPLINHCIKQQPDFNILMTTTTTSA 3
           HAVSLGE +A IP+I  CI+++PD  +LMTTTT SA
Sbjct: 61  HAVSLGEGLATIPIIKQCIQRRPDLVVLMTTTTYSA 96


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