BLASTX nr result

ID: Coptis25_contig00023940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023940
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275524.1| PREDICTED: uncharacterized protein LOC100244...   146   3e-33
ref|XP_002516213.1| conserved hypothetical protein [Ricinus comm...   131   1e-28
ref|XP_002326308.1| SAUR family protein [Populus trichocarpa] gi...   131   1e-28
ref|XP_003542379.1| PREDICTED: uncharacterized protein LOC100808...   128   8e-28
ref|XP_003551049.1| PREDICTED: uncharacterized protein LOC100792...   127   2e-27

>ref|XP_002275524.1| PREDICTED: uncharacterized protein LOC100244113 [Vitis vinifera]
           gi|297738513|emb|CBI27758.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score =  146 bits (369), Expect = 3e-33
 Identities = 74/113 (65%), Positives = 86/113 (76%)
 Frame = +1

Query: 115 SVLKKWNSMSKAGRSNSSISAAATSEDEYSFSADKNHSGDLHAVYVGKSRRRYLIAADVI 294
           SV+KKW S+ K GR+N S  AAA+  D      D + S DLH VYVGKSRRRYL+ +DV+
Sbjct: 14  SVIKKWQSIGKLGRANGSSIAAASPSD------DDSDSRDLHPVYVGKSRRRYLVGSDVM 67

Query: 295 ENPLVRELVGRSSGSDEFTVDCEVVLFEHLLWMLDNADPQPESLDELVEFYAC 453
           E+PL RELV RS  SD   V CEVVLFEHLLWML+NADP+PESL+ELVEFYAC
Sbjct: 68  EHPLFRELVERSGDSDTVNVACEVVLFEHLLWMLENADPRPESLEELVEFYAC 120


>ref|XP_002516213.1| conserved hypothetical protein [Ricinus communis]
           gi|223544699|gb|EEF46215.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 123

 Score =  131 bits (329), Expect = 1e-28
 Identities = 71/115 (61%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = +1

Query: 115 SVLKKWNSMSKAGRSNSSISAAATSEDEYSFSADKNHSGDLHAVYVGKSRRRYLIAADVI 294
           SVLKK NS +      S  S AAT++D    S      GDLH VYVGKSRRRYLI++D+I
Sbjct: 12  SVLKKLNSFNSKQSRPSGSSIAATADDS---STSSYSVGDLHPVYVGKSRRRYLISSDII 68

Query: 295 ENPLVRELVGRSSGSDEFTVD--CEVVLFEHLLWMLDNADPQPESLDELVEFYAC 453
           ++PL REL  RSS SD+ T+   CEVVLFEHLLWML+N D Q ESLDELVEFYAC
Sbjct: 69  DHPLFRELAERSSESDDHTISIACEVVLFEHLLWMLENGDTQAESLDELVEFYAC 123


>ref|XP_002326308.1| SAUR family protein [Populus trichocarpa]
           gi|222833501|gb|EEE71978.1| SAUR family protein [Populus
           trichocarpa]
          Length = 126

 Score =  131 bits (329), Expect = 1e-28
 Identities = 73/118 (61%), Positives = 85/118 (72%), Gaps = 5/118 (4%)
 Frame = +1

Query: 115 SVLKKWNSMS--KAGRSNSSISAAATSEDEYSFSADKNHSGDLHAVYVGKSRRRYLIAAD 288
           SVLKK NS +  K  R +   S+ + + D+ S S     SGDLH VYVGKSRRRYLI++D
Sbjct: 12  SVLKKLNSFNNNKQSRPSKIGSSISVTNDDISSSYS---SGDLHPVYVGKSRRRYLISSD 68

Query: 289 VIENPLVRELVGRSS---GSDEFTVDCEVVLFEHLLWMLDNADPQPESLDELVEFYAC 453
           +I++PL REL  RSS     D   V CEVVLFEHLLWML+NADPQPESLDELVEFYAC
Sbjct: 69  IIDHPLFRELAERSSTEQSPDTINVACEVVLFEHLLWMLENADPQPESLDELVEFYAC 126


>ref|XP_003542379.1| PREDICTED: uncharacterized protein LOC100808463 [Glycine max]
          Length = 127

 Score =  128 bits (322), Expect = 8e-28
 Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 9/122 (7%)
 Frame = +1

Query: 115 SVLKKWNSMSKAGRSNSSISAAATSEDEYSFSADKNHSGDLHAVYVGKSRRRYLIAADVI 294
           SVLKKWNS     + +   S +A ++DE S  +D      LHAVYVGKSRR Y +A+DV+
Sbjct: 12  SVLKKWNSFGNNSKHSRHHSISAVADDESSSRSD------LHAVYVGKSRRLYRVASDVV 65

Query: 295 ENPLVRELVGRSSGSDEF---------TVDCEVVLFEHLLWMLDNADPQPESLDELVEFY 447
           ++P+ RELV RS  SD+           V CEVVLFEHLLWMLDNADPQPESL+ELV+FY
Sbjct: 66  DHPVFRELVERSRDSDQQQQSEDTTINVVACEVVLFEHLLWMLDNADPQPESLNELVDFY 125

Query: 448 AC 453
           AC
Sbjct: 126 AC 127


>ref|XP_003551049.1| PREDICTED: uncharacterized protein LOC100792286 [Glycine max]
          Length = 127

 Score =  127 bits (319), Expect = 2e-27
 Identities = 67/122 (54%), Positives = 84/122 (68%), Gaps = 9/122 (7%)
 Frame = +1

Query: 115 SVLKKWNSMSKAGRSNSSISAAATSEDEYSFSADKNHSGDLHAVYVGKSRRRYLIAADVI 294
           SVLKKWNS     + +   S++A ++DE S  +D      LHAVYVGKSRR Y +++DV+
Sbjct: 12  SVLKKWNSFGNGSKHSRHHSSSAVADDESSSRSD------LHAVYVGKSRRLYRVSSDVV 65

Query: 295 ENPLVRELVGRSSGSDEF---------TVDCEVVLFEHLLWMLDNADPQPESLDELVEFY 447
           ++P+ RELV RS  SD+           V CEVVLFEHLLWMLDNADPQPESL+ELV+FY
Sbjct: 66  DHPVFRELVERSRDSDQQQNEDTTTINVVACEVVLFEHLLWMLDNADPQPESLNELVDFY 125

Query: 448 AC 453
            C
Sbjct: 126 GC 127


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