BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023936
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-27
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...   125   6e-27
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop...    97   4e-18

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  128 bits (321), Expect = 1e-27
 Identities = 65/174 (37%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
 Frame = -2

Query: 652 IGDGKNTSFWLDPWHPSGILKGKFPQAFLYSSRGHLNITVGEFIEQGKWCFPEHIENGIR 473
           IGDG  TS W D WHP   L   + + F+Y S    N  V   I+  +W  P     G  
Sbjct: 235 IGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH 294

Query: 472 EIAEQAKDEIEI-MGGDDRMVWTATHQGDYSLRDTYEGLRGIRQAVTWHRLVWFSNRIPR 296
            I E         MG  D +VW  +    +S++  +E LR  RQ V WH +VWF N +PR
Sbjct: 295 PIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPR 354

Query: 295 QSFISWMAMNRGLKTLDKMKEWKKVDSNTCILCWREIENEEHLFHDCSFSMAVW 134
            SF+ WMA+ + L T DK+  +     N C LC R  E+  HLF +CS++ A+W
Sbjct: 355 HSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 408


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  125 bits (315), Expect = 6e-27
 Identities = 63/174 (36%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
 Frame = -2

Query: 652  IGDGKNTSFWLDPWHPSGILKGKFPQAFLYSSRGHLNITVGEFIEQGKWCFPEHIENGIR 473
            IGDG  TS W D WHP   L   + + F+Y S    N  V   I+  +W  P     G  
Sbjct: 768  IGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH 827

Query: 472  EIAEQAKDEIEI-MGGDDRMVWTATHQGDYSLRDTYEGLRGIRQAVTWHRLVWFSNRIPR 296
             I E         MG  D ++W  +    +S++  +E LR  RQ V WH +VWF N +PR
Sbjct: 828  PIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPR 887

Query: 295  QSFISWMAMNRGLKTLDKMKEWKKVDSNTCILCWREIENEEHLFHDCSFSMAVW 134
             SF+ WM + + L T DK+  +     N C LC R  E+  HLF +CS++ A+W
Sbjct: 888  HSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 941


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  125 bits (313), Expect = 1e-26
 Identities = 64/174 (36%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
 Frame = -2

Query: 652  IGDGKNTSFWLDPWHPSGILKGKFPQAFLYSSRGHLNITVGEFIEQGKWCFPEHIENGIR 473
            IGDG  TS W D WHP   L   + + F+Y S    N  V   I+  +W  P     G  
Sbjct: 1108 IGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH 1167

Query: 472  EIAEQAKDEIEI-MGGDDRMVWTATHQGDYSLRDTYEGLRGIRQAVTWHRLVWFSNRIPR 296
             I E         MG  D +VW  +    + ++  +E LR  RQ V WH +VWF N +PR
Sbjct: 1168 PIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPR 1227

Query: 295  QSFISWMAMNRGLKTLDKMKEWKKVDSNTCILCWREIENEEHLFHDCSFSMAVW 134
             SF+ WMA+ + L T DK+  +     N C LC R  E+  HLF +CS++ A+W
Sbjct: 1228 HSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 1281


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  124 bits (311), Expect = 2e-26
 Identities = 63/174 (36%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
 Frame = -2

Query: 652 IGDGKNTSFWLDPWHPSGILKGKFPQAFLYSSRGHLNITVGEFIEQGKWCFPEHIENGIR 473
           IGDG  TS W D WHP   L   + + F+Y S    N  V   I+  +W  P     G  
Sbjct: 53  IGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH 112

Query: 472 EIAEQAKDEIEI-MGGDDRMVWTATHQGDYSLRDTYEGLRGIRQAVTWHRLVWFSNRIPR 296
            I E         MG  D +VW  +    +S++  +E LR  R  V WH +VWF N +PR
Sbjct: 113 PIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPR 172

Query: 295 QSFISWMAMNRGLKTLDKMKEWKKVDSNTCILCWREIENEEHLFHDCSFSMAVW 134
            SF+ WM + + L T DK+  +     N C LC R  E+  HLF +CS++ A+W
Sbjct: 173 HSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 226


>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
          Length = 278

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
 Frame = -2

Query: 655 QIGDGKNTSFWLDPWHPSGILKGKFPQAFLYSSRGHLNI------TVGEFIE-----QGK 509
           ++  G  TSFW D W P G L           SRG +++      TV E ++     + +
Sbjct: 2   EVRSGTTTSFWHDHWSPLGRLHQHL------GSRGTIDLGIATQATVAEVLDTHRRKRHR 55

Query: 508 WCFPEHIENGIREIAEQAKDEIEIMGGDDRMVWTA---THQGDYSLRDTYEGLRGIRQAV 338
             F   IEN I E+  QA+ +       DR +W     + +G +S   T++ +R I    
Sbjct: 56  ADFLNQIENHI-ELVRQARSQ-----ESDRSLWKQKEDSFKGSFSSPKTWQQIRTISNEC 109

Query: 337 TWHRLVWFSNRIPRQSFISWMAMNRGLKTLDKMKEWKKVDSNTCILCWREIENEEHLFHD 158
            W+R VWF +  P+ SF++W+A +  L T D++ +W      TC+ C  E+E  +HLF  
Sbjct: 110 EWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFS 169

Query: 157 CSFSMAVWQTL 125
           C +S  +W  L
Sbjct: 170 CPYSSQIWIAL 180