BLASTX nr result

ID: Coptis25_contig00023923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023923
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267247.1| PREDICTED: solute carrier family 22 member 3...   152   3e-35
ref|XP_003548308.1| PREDICTED: solute carrier family 22 member 3...   149   2e-34
gb|AAO83155.1|AF402773_1 putative organic cation transport prote...   147   7e-34
ref|XP_003534097.1| PREDICTED: solute carrier family 22 member 3...   145   3e-33
ref|XP_002318335.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32

>ref|XP_002267247.1| PREDICTED: solute carrier family 22 member 3 [Vitis vinifera]
           gi|297742779|emb|CBI35459.3| unnamed protein product
           [Vitis vinifera]
          Length = 527

 Score =  152 bits (384), Expect = 3e-35
 Identities = 87/163 (53%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
 Frame = +2

Query: 2   LSFMDRRXXXXXXAFLAGVSCIFCIFFSR*DNEGVNENNGSKGSWLQLSAEAAGFMAAST 181
           LSF +RR        LAGV+CI CIFFS  +  G      S+GSW QLS EA GFMAAST
Sbjct: 367 LSFTNRRLLFSSSICLAGVACIVCIFFS--EAGGRRRREESRGSWPQLSIEAIGFMAAST 424

Query: 182 TFDVLYVYCVELFPTNVRNFAVSLLRQVLKLGASITPXXXXXXXXXXXXXFLIFGVFAIF 361
            FDVLY+YCVELFPTNVRNFAVS+LRQ L LGASI P             FLIFG+ ++ 
Sbjct: 425 AFDVLYIYCVELFPTNVRNFAVSMLRQSLMLGASIAPLLVVVGRLSPARSFLIFGILSMV 484

Query: 362 IGILTLILPETRNSSLYETLXXXXXXXXKLRVGPDNC-LELGK 487
            G+L + LPET+N+ LYETL           +  D+  LELGK
Sbjct: 485 SGLLGMSLPETKNAPLYETLEQQEEEEKLTCLASDDSGLELGK 527


>ref|XP_003548308.1| PREDICTED: solute carrier family 22 member 3-like isoform 1
           [Glycine max] gi|356560051|ref|XP_003548309.1|
           PREDICTED: solute carrier family 22 member 3-like
           isoform 2 [Glycine max]
          Length = 540

 Score =  149 bits (376), Expect = 2e-34
 Identities = 81/164 (49%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
 Frame = +2

Query: 2   LSFMDRRXXXXXXAFLAGVSCIFCIFFS-R*DNEGVNENNGSKGSWLQLSAEAAGFMAAS 178
           L F +RR      +++A VS I C FFS +     V+ NN   G+W QL  EA GFM AS
Sbjct: 377 LGFTNRRLLLSVSSYIAAVSSILCTFFSHKGGTSKVHNNNSYGGNWGQLIIEAIGFMGAS 436

Query: 179 TTFDVLYVYCVELFPTNVRNFAVSLLRQVLKLGASITPXXXXXXXXXXXXXFLIFGVFAI 358
           T FD+LY+YCVELFPTNVRNFAVS+LRQ + LGAS+ P             FL+FGVFAI
Sbjct: 437 TAFDILYIYCVELFPTNVRNFAVSMLRQAIMLGASVAPLLVVLGRLSPSLSFLVFGVFAI 496

Query: 359 FIGILTLILPETRNSSLYETLXXXXXXXXKLRVGPDNC-LELGK 487
             G+L++ LPETRN+ LYETL           +  ++C LE+GK
Sbjct: 497 SSGVLSIWLPETRNAPLYETLKQQEEEEKHSWMSQNDCALEMGK 540


>gb|AAO83155.1|AF402773_1 putative organic cation transport protein [Phaseolus vulgaris]
          Length = 547

 Score =  147 bits (372), Expect = 7e-34
 Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
 Frame = +2

Query: 2   LSFMDRRXXXXXXAFLAGVSCIFCIFFS-R*DNEGVNENNGSKGSWLQLSAEAAGFMAAS 178
           L F +RR      +++A VS I C FFS R     V+ N+G  GSW QL  EA GFM AS
Sbjct: 386 LGFTNRRLLLSVSSYIAAVSSILCTFFSHRGKTSKVHSNHG--GSWAQLIIEAIGFMGAS 443

Query: 179 TTFDVLYVYCVELFPTNVRNFAVSLLRQVLKLGASITPXXXXXXXXXXXXXFLIFGVFAI 358
           TTFD+LY+YCVELFPTNVRNFAVS+LRQ + LGAS+ P             F +FG F+I
Sbjct: 444 TTFDILYIYCVELFPTNVRNFAVSMLRQAIMLGASVAPLLVVLGRLSPSLSFFVFGAFSI 503

Query: 359 FIGILTLILPETRNSSLYETLXXXXXXXXKLRVGPDNC-LELGK 487
             G+L+L LPETRN+ LYETL           V  ++C LELG+
Sbjct: 504 SSGVLSLWLPETRNAPLYETLKQQEEEEKHNWVSHNDCALELGQ 547


>ref|XP_003534097.1| PREDICTED: solute carrier family 22 member 3-like [Glycine max]
          Length = 543

 Score =  145 bits (367), Expect = 3e-33
 Identities = 81/163 (49%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
 Frame = +2

Query: 2   LSFMDRRXXXXXXAFLAGVSCIFCIFFSR*DNEGVNENNGSKGSWLQLSAEAAGFMAAST 181
           L F +RR      +++A VS I C F S   +     NN S G+W QL  EA GFM AST
Sbjct: 382 LGFTNRRLLLSMSSYIAAVSSILCTFLSHKGSTSKVHNNNS-GNWGQLIIEAIGFMGAST 440

Query: 182 TFDVLYVYCVELFPTNVRNFAVSLLRQVLKLGASITPXXXXXXXXXXXXXFLIFGVFAIF 361
            FD+LY+YCVELFPTNVRNFAVS+LRQ L LGAS+ P             FL+FGV AI 
Sbjct: 441 AFDILYIYCVELFPTNVRNFAVSMLRQALMLGASVAPLLVVLGRLSPSISFLVFGVLAIS 500

Query: 362 IGILTLILPETRNSSLYETLXXXXXXXXKLRVGPDNC-LELGK 487
            G+L++ LPETRN+ LYETL           V  ++C LE+GK
Sbjct: 501 SGVLSICLPETRNAPLYETLKQQEEEEKHNWVSHNDCALEMGK 543


>ref|XP_002318335.1| predicted protein [Populus trichocarpa] gi|222859008|gb|EEE96555.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  143 bits (361), Expect = 1e-32
 Identities = 74/140 (52%), Positives = 88/140 (62%)
 Frame = +2

Query: 2   LSFMDRRXXXXXXAFLAGVSCIFCIFFSR*DNEGVNENNGSKGSWLQLSAEAAGFMAAST 181
           L    RR      AFLAG+SC+ CI F+       N +  S G+W QL+ E  GFMAAS 
Sbjct: 390 LGLTGRRLLFSLSAFLAGISCLLCILFAH-GKRAKNADKSSTGNWAQLAIEGIGFMAASV 448

Query: 182 TFDVLYVYCVELFPTNVRNFAVSLLRQVLKLGASITPXXXXXXXXXXXXXFLIFGVFAIF 361
            FDVLYVYCVELFPTNVRNFAVS  RQ L LGASI P             FL+FG+ +IF
Sbjct: 449 AFDVLYVYCVELFPTNVRNFAVSQSRQALMLGASIAPLLVAAGRLSPSLSFLVFGILSIF 508

Query: 362 IGILTLILPETRNSSLYETL 421
            G+++  LPETRN+ LY+TL
Sbjct: 509 SGVISWWLPETRNAPLYDTL 528


Top