BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023916
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus...   147   2e-33
ref|XP_002310534.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33
ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycin...   144   2e-32
ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [C...   143   3e-32
ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis ...   143   4e-32

>ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus communis]
           gi|223548409|gb|EEF49900.1| 50S ribosomal protein L18,
           putative [Ricinus communis]
          Length = 115

 Score =  147 bits (372), Expect = 2e-33
 Identities = 75/101 (74%), Positives = 85/101 (84%)
 Frame = -3

Query: 411 EFLKPYVLKMHFTNKYVSAQVLHXXXXXXXXXXXSQEKVLRTRMENTRDVAAAAKIGKIL 232
           +FLKPYVLKMHFTNK+VSAQV+H           SQEK LR  MENTRDVAAAAKIGKIL
Sbjct: 15  DFLKPYVLKMHFTNKFVSAQVIHSPSATVACSASSQEKALRPSMENTRDVAAAAKIGKIL 74

Query: 231 GERLLLKEIPAVTVFLKREQRYHGKVKAVIDSVRAAGVKLI 109
           GERLL+K IPA++VFLKREQ+YHGKVKAV+DSVR +GVKL+
Sbjct: 75  GERLLVKGIPAISVFLKREQKYHGKVKAVVDSVRESGVKLL 115


>ref|XP_002310534.1| predicted protein [Populus trichocarpa] gi|222853437|gb|EEE90984.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score =  145 bits (366), Expect = 8e-33
 Identities = 74/101 (73%), Positives = 83/101 (82%)
 Frame = -3

Query: 411 EFLKPYVLKMHFTNKYVSAQVLHXXXXXXXXXXXSQEKVLRTRMENTRDVAAAAKIGKIL 232
           +FLKPYVLKMHFTN+YV+AQV H           SQEK LR+ MENTRDVAAAAKIGKIL
Sbjct: 14  QFLKPYVLKMHFTNQYVNAQVTHSPTATVASAASSQEKALRSTMENTRDVAAAAKIGKIL 73

Query: 231 GERLLLKEIPAVTVFLKREQRYHGKVKAVIDSVRAAGVKLI 109
           GERLLLK+IPAVTVFL R Q+YHGKVKAVIDS+R  G+K+I
Sbjct: 74  GERLLLKDIPAVTVFLNRNQKYHGKVKAVIDSLREVGIKII 114


>ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycine max]
           gi|255631236|gb|ACU15985.1| unknown [Glycine max]
          Length = 114

 Score =  144 bits (363), Expect = 2e-32
 Identities = 74/101 (73%), Positives = 84/101 (83%)
 Frame = -3

Query: 411 EFLKPYVLKMHFTNKYVSAQVLHXXXXXXXXXXXSQEKVLRTRMENTRDVAAAAKIGKIL 232
           +FLKPYVLKMHFTNKYVSAQV+H           SQEK LR+ +E +RDVAAAAKIGKIL
Sbjct: 14  QFLKPYVLKMHFTNKYVSAQVIHTPTATVVSSASSQEKALRSSLETSRDVAAAAKIGKIL 73

Query: 231 GERLLLKEIPAVTVFLKREQRYHGKVKAVIDSVRAAGVKLI 109
            ERLLLK+IPAV+V LKREQ+YHGKVKAVIDS+R AGVKL+
Sbjct: 74  AERLLLKDIPAVSVHLKREQKYHGKVKAVIDSIREAGVKLL 114


>ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
           gi|449480883|ref|XP_004156021.1| PREDICTED: 50S
           ribosomal protein L18-like [Cucumis sativus]
          Length = 114

 Score =  143 bits (361), Expect = 3e-32
 Identities = 74/101 (73%), Positives = 84/101 (83%)
 Frame = -3

Query: 411 EFLKPYVLKMHFTNKYVSAQVLHXXXXXXXXXXXSQEKVLRTRMENTRDVAAAAKIGKIL 232
           ++LKPYVLKMHFTNK+VSAQV+H           SQEK L++ ME+TRDVAAAAKIGK+L
Sbjct: 14  QYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIGKLL 73

Query: 231 GERLLLKEIPAVTVFLKREQRYHGKVKAVIDSVRAAGVKLI 109
           GERLLLK IPAV V LKREQRYHGKVKAVIDSVR AG+KL+
Sbjct: 74  GERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIKLL 114


>ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
           gi|296089732|emb|CBI39551.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  143 bits (360), Expect = 4e-32
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = -3

Query: 411 EFLKPYVLKMHFTNKYVSAQVLHXXXXXXXXXXXSQEKVLRTRMENTRDVAAAAKIGKIL 232
           +FLKPYVLKMHFTNK+V+AQV+H           SQEK LR+ ME+TRDVAAAA IGKIL
Sbjct: 14  KFLKPYVLKMHFTNKFVNAQVIHSPTATVASAASSQEKTLRSTMESTRDVAAAAMIGKIL 73

Query: 231 GERLLLKEIPAVTVFLKREQRYHGKVKAVIDSVRAAGVKLI 109
           GERLLL++IPAVTVFLKR+Q+YHGKVKAVIDS+R  G+KL+
Sbjct: 74  GERLLLQDIPAVTVFLKRDQKYHGKVKAVIDSLREVGIKLL 114