BLASTX nr result

ID: Coptis25_contig00023915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023915
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238678.1| uncharacterized protein LOC100499707 [Glycin...   192   6e-47
ref|XP_002270931.1| PREDICTED: zinc finger protein 593-like [Vit...   191   1e-46
ref|NP_001235201.1| uncharacterized protein LOC100527632 [Glycin...   187   1e-45
ref|XP_002326198.1| predicted protein [Populus trichocarpa] gi|1...   186   3e-45
ref|XP_002322894.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44

>ref|NP_001238678.1| uncharacterized protein LOC100499707 [Glycine max]
           gi|255625975|gb|ACU13332.1| unknown [Glycine max]
          Length = 119

 Score =  192 bits (487), Expect = 6e-47
 Identities = 94/120 (78%), Positives = 99/120 (82%)
 Frame = -1

Query: 606 MGGKCPHRKVKKRRLSHKSARRTKFELKGDDAVYDELKKTDGGASKSLPLDEDLPGMGQF 427
           MGGKCPHR VKKRR SHK+ARRTKFELKGDD VY +L K D   +  LPLDEDLPGMGQ+
Sbjct: 1   MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDEERAP-LPLDEDLPGMGQY 59

Query: 426 YCLHCDRYFSNVAVRDEHFXXXXXXXXXKIMMGPAPHTQLDADLAAGMGMPDNGPKLMSM 247
           YCLHCDRYFSNVAVRDEHF         K MMGPAPHTQLDAD+AAGMGMPDNGPKLMSM
Sbjct: 60  YCLHCDRYFSNVAVRDEHFKTKRHKKRIKQMMGPAPHTQLDADVAAGMGMPDNGPKLMSM 119


>ref|XP_002270931.1| PREDICTED: zinc finger protein 593-like [Vitis vinifera]
          Length = 119

 Score =  191 bits (485), Expect = 1e-46
 Identities = 93/120 (77%), Positives = 100/120 (83%)
 Frame = -1

Query: 606 MGGKCPHRKVKKRRLSHKSARRTKFELKGDDAVYDELKKTDGGASKSLPLDEDLPGMGQF 427
           MGGKCP RKVKKRR SHK+ARR KF LKGDDAVYDEL K +G   K LP+DEDLPGMGQ+
Sbjct: 1   MGGKCPSRKVKKRRYSHKTARRDKFLLKGDDAVYDELNKPEG-EKKPLPVDEDLPGMGQY 59

Query: 426 YCLHCDRYFSNVAVRDEHFXXXXXXXXXKIMMGPAPHTQLDADLAAGMGMPDNGPKLMSM 247
           YCLHCDRYF+NVAVRDEHF         K MMGPAPHTQLDADLAAGMG+PDNGPKLMS+
Sbjct: 60  YCLHCDRYFANVAVRDEHFKTKRHKKRLKQMMGPAPHTQLDADLAAGMGLPDNGPKLMSI 119


>ref|NP_001235201.1| uncharacterized protein LOC100527632 [Glycine max]
           gi|255632816|gb|ACU16761.1| unknown [Glycine max]
          Length = 119

 Score =  187 bits (475), Expect = 1e-45
 Identities = 90/120 (75%), Positives = 97/120 (80%)
 Frame = -1

Query: 606 MGGKCPHRKVKKRRLSHKSARRTKFELKGDDAVYDELKKTDGGASKSLPLDEDLPGMGQF 427
           MGGKCPHR VKKRR SHK+ARRTKFELKGDD VY +L K D      LP+DEDLPGMGQ+
Sbjct: 1   MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDQ-ERPPLPVDEDLPGMGQY 59

Query: 426 YCLHCDRYFSNVAVRDEHFXXXXXXXXXKIMMGPAPHTQLDADLAAGMGMPDNGPKLMSM 247
           YCLHCDRYF+N+ VRDEHF         K MMGPAPHTQLDADLA+GMGMPDNGPKLMSM
Sbjct: 60  YCLHCDRYFANITVRDEHFKTKRHKKRIKQMMGPAPHTQLDADLASGMGMPDNGPKLMSM 119


>ref|XP_002326198.1| predicted protein [Populus trichocarpa] gi|118482423|gb|ABK93134.1|
           unknown [Populus trichocarpa]
           gi|222833391|gb|EEE71868.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  186 bits (472), Expect = 3e-45
 Identities = 90/120 (75%), Positives = 97/120 (80%)
 Frame = -1

Query: 606 MGGKCPHRKVKKRRLSHKSARRTKFELKGDDAVYDELKKTDGGASKSLPLDEDLPGMGQF 427
           MGGKCP RKVKKRR SHK+ARR+KF LK DDAVY+EL+K DG     LPLDEDLPGMGQ+
Sbjct: 1   MGGKCPSRKVKKRRYSHKTARRSKFLLKADDAVYEELQKPDGEMKSILPLDEDLPGMGQY 60

Query: 426 YCLHCDRYFSNVAVRDEHFXXXXXXXXXKIMMGPAPHTQLDADLAAGMGMPDNGPKLMSM 247
           YCLHCDRYF+NV VRDEHF         K MMGPAPHTQLDA+LAAGMG PDNG KLMSM
Sbjct: 61  YCLHCDRYFANVTVRDEHFKTKRHKKRVKQMMGPAPHTQLDAELAAGMGAPDNGLKLMSM 120


>ref|XP_002322894.1| predicted protein [Populus trichocarpa] gi|222867524|gb|EEF04655.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score =  184 bits (467), Expect = 1e-44
 Identities = 91/122 (74%), Positives = 100/122 (81%), Gaps = 2/122 (1%)
 Frame = -1

Query: 606 MGGKCPHRKVKKRRLSHKSARRTKFELKGDDAVYDELKKTDGGASK--SLPLDEDLPGMG 433
           MGGKCP RKVKKRR SHK+ARR+KF LKGDDAVY+EL++   G  K  +LPLDEDLPGMG
Sbjct: 1   MGGKCPSRKVKKRRYSHKTARRSKFLLKGDDAVYEELQQKPDGEMKEATLPLDEDLPGMG 60

Query: 432 QFYCLHCDRYFSNVAVRDEHFXXXXXXXXXKIMMGPAPHTQLDADLAAGMGMPDNGPKLM 253
           Q+YCLHCDRYF+NV+VRDEHF         K MMGPAPHTQLDADLAAGMG PDNG KLM
Sbjct: 61  QYYCLHCDRYFANVSVRDEHFKTKRHKKRVKQMMGPAPHTQLDADLAAGMGAPDNGLKLM 120

Query: 252 SM 247
           SM
Sbjct: 121 SM 122


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