BLASTX nr result

ID: Coptis25_contig00023901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023901
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33771.3| unnamed protein product [Vitis vinifera]              360   2e-97
ref|XP_002283607.1| PREDICTED: microtubule-associated protein RP...   360   2e-97
gb|AFK36006.1| unknown [Lotus japonicus]                              352   4e-95
gb|AFK42522.1| unknown [Lotus japonicus]                              352   5e-95
emb|CAN59804.1| hypothetical protein VITISV_038876 [Vitis vinifera]   352   5e-95

>emb|CBI33771.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  360 bits (923), Expect = 2e-97
 Identities = 186/244 (76%), Positives = 202/244 (82%), Gaps = 2/244 (0%)
 Frame = +2

Query: 47  MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDSVHPGIVPMHKV 226
           MATNIGMMD+AYFVGRSEIL+WINSTLQLNLSKVEE CSGAVHCQLMDSVHPGIVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGIVPMHKV 60

Query: 227 NFDAKSEYEMIQNFKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYFDSVSGG 406
           NFDAK+EYEMIQN+KVLQDVFNKL+ITKHIEVSKLVKGRPLDNLEFMQWMKRY DSV+ G
Sbjct: 61  NFDAKNEYEMIQNYKVLQDVFNKLRITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVN-G 119

Query: 407 GQSNNYNPLERREACKGSKEVGKRXXXXXXXXXXXXXXXXXXXXXNSRKNDAHPVN--NA 580
           G  N+YNPLERREA KG KE  K+                     N+RKNDA   +  N 
Sbjct: 120 GLLNSYNPLERREASKGGKEASKK--PSQPSAKSSTAAPKAQPSHNARKNDASSASTTNL 177

Query: 581 AAKVARPSSSGGPAYDEQITELKLSVDSLEKERDFYFAKLRDIEILCQTPDIEHLPVVAA 760
           + KV+RP SSGGPAYDE+ITELKLS+DSLEKERDFYFAKLRDIEILCQ P+IEHL VV A
Sbjct: 178 SVKVSRPGSSGGPAYDEKITELKLSIDSLEKERDFYFAKLRDIEILCQCPEIEHLTVVGA 237

Query: 761 IQSI 772
           I+ I
Sbjct: 238 IKRI 241


>ref|XP_002283607.1| PREDICTED: microtubule-associated protein RP/EB family member
           1-like [Vitis vinifera]
          Length = 326

 Score =  360 bits (923), Expect = 2e-97
 Identities = 186/244 (76%), Positives = 202/244 (82%), Gaps = 2/244 (0%)
 Frame = +2

Query: 47  MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDSVHPGIVPMHKV 226
           MATNIGMMD+AYFVGRSEIL+WINSTLQLNLSKVEE CSGAVHCQLMDSVHPGIVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGIVPMHKV 60

Query: 227 NFDAKSEYEMIQNFKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYFDSVSGG 406
           NFDAK+EYEMIQN+KVLQDVFNKL+ITKHIEVSKLVKGRPLDNLEFMQWMKRY DSV+ G
Sbjct: 61  NFDAKNEYEMIQNYKVLQDVFNKLRITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVN-G 119

Query: 407 GQSNNYNPLERREACKGSKEVGKRXXXXXXXXXXXXXXXXXXXXXNSRKNDAHPVN--NA 580
           G  N+YNPLERREA KG KE  K+                     N+RKNDA   +  N 
Sbjct: 120 GLLNSYNPLERREASKGGKEASKK--PSQPSAKSSTAAPKAQPSHNARKNDASSASTTNL 177

Query: 581 AAKVARPSSSGGPAYDEQITELKLSVDSLEKERDFYFAKLRDIEILCQTPDIEHLPVVAA 760
           + KV+RP SSGGPAYDE+ITELKLS+DSLEKERDFYFAKLRDIEILCQ P+IEHL VV A
Sbjct: 178 SVKVSRPGSSGGPAYDEKITELKLSIDSLEKERDFYFAKLRDIEILCQCPEIEHLTVVGA 237

Query: 761 IQSI 772
           I+ I
Sbjct: 238 IKRI 241


>gb|AFK36006.1| unknown [Lotus japonicus]
          Length = 327

 Score =  352 bits (904), Expect = 4e-95
 Identities = 184/245 (75%), Positives = 199/245 (81%), Gaps = 3/245 (1%)
 Frame = +2

Query: 47  MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDSVHPGIVPMHKV 226
           MATNIG+MDAAYFVGRSEILAWINSTLQLNLSKVEE CSGAVHCQL+D VHPGIVPMHKV
Sbjct: 1   MATNIGIMDAAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLLDVVHPGIVPMHKV 60

Query: 227 NFDAKSEYEMIQNFKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYFDSVSGG 406
           NFDAK+EY+MIQN+KVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRY DSV+ G
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSG 120

Query: 407 GQSNNYNPLERREACKGSKEVGKRXXXXXXXXXXXXXXXXXXXXXNSRKNDAHPVNN--- 577
            Q +NYNP ERRE CKG KE   R                     NSR+N+A    N   
Sbjct: 121 LQ-HNYNPRERREVCKGGKE-ATRKSAHSQSSNKGSTAQRPPSSHNSRRNEASAAANHAT 178

Query: 578 AAAKVARPSSSGGPAYDEQITELKLSVDSLEKERDFYFAKLRDIEILCQTPDIEHLPVVA 757
            AAKVA+PSS+  PAYDEQITELKLS+DSLEKERDFYFAKLRDIEILCQ P+IE+ PVVA
Sbjct: 179 QAAKVAKPSSAAAPAYDEQITELKLSIDSLEKERDFYFAKLRDIEILCQIPEIENSPVVA 238

Query: 758 AIQSI 772
           A+Q I
Sbjct: 239 AMQKI 243


>gb|AFK42522.1| unknown [Lotus japonicus]
          Length = 327

 Score =  352 bits (903), Expect = 5e-95
 Identities = 184/245 (75%), Positives = 199/245 (81%), Gaps = 3/245 (1%)
 Frame = +2

Query: 47  MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDSVHPGIVPMHKV 226
           MATNIG+MDAAYFVGRSEILAWINSTLQLNLSKVEE CSGAVHCQL+D VHPGIVPMHKV
Sbjct: 1   MATNIGIMDAAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLLDVVHPGIVPMHKV 60

Query: 227 NFDAKSEYEMIQNFKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYFDSVSGG 406
           NFDAK+EY+MIQN+KVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRY DSV+ G
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSG 120

Query: 407 GQSNNYNPLERREACKGSKEVGKRXXXXXXXXXXXXXXXXXXXXXNSRKNDAHPVNN--- 577
            Q +NYNP ERRE CKG KE   R                     NSR+N+A    N   
Sbjct: 121 LQ-HNYNPRERREVCKGGKE-ATRKSAHSQSSNKGSTAQRPPSSHNSRRNEASAAANHAT 178

Query: 578 AAAKVARPSSSGGPAYDEQITELKLSVDSLEKERDFYFAKLRDIEILCQTPDIEHLPVVA 757
            AAKVA+PSS+  PAYDEQITELKLS+DSLEKERDFYFAKLRDIEILCQ P+IE+ PVVA
Sbjct: 179 HAAKVAKPSSAAAPAYDEQITELKLSIDSLEKERDFYFAKLRDIEILCQIPEIENSPVVA 238

Query: 758 AIQSI 772
           A+Q I
Sbjct: 239 AMQKI 243


>emb|CAN59804.1| hypothetical protein VITISV_038876 [Vitis vinifera]
          Length = 415

 Score =  352 bits (903), Expect = 5e-95
 Identities = 187/256 (73%), Positives = 202/256 (78%), Gaps = 14/256 (5%)
 Frame = +2

Query: 47  MATNIGMMDAAYFVGRSEILAWINSTLQLNLSKVEEGCSGAVHCQLMDSVHPGIVPMHKV 226
           MATNIGMMD+AYFVGRSEIL+WINSTLQLNLSKVEE CSGAVHCQLMDSVHPGIVPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGIVPMHKV 60

Query: 227 NFDAKSEYEMIQNFKVLQDVFNKLKITK------------HIEVSKLVKGRPLDNLEFMQ 370
           NFDAK+EYEMIQN+KVLQDVFNKLKITK            HIEVSKLVKGRPLDNLEFMQ
Sbjct: 61  NFDAKNEYEMIQNYKVLQDVFNKLKITKVIDLFILVEGFQHIEVSKLVKGRPLDNLEFMQ 120

Query: 371 WMKRYFDSVSGGGQSNNYNPLERREACKGSKEVGKRXXXXXXXXXXXXXXXXXXXXXNSR 550
           WMKRY DSV+ GG  N+YNPLERREA KG KE  K+                     N+R
Sbjct: 121 WMKRYCDSVN-GGLLNSYNPLERREASKGGKEASKK--PSQPSAKSSTAAPKAQPSHNAR 177

Query: 551 KNDAHPVN--NAAAKVARPSSSGGPAYDEQITELKLSVDSLEKERDFYFAKLRDIEILCQ 724
           KNDA   +  N + KV+RP SSGGPAYDE+ITELKLS+DSLEKERDFYFAKLRDIEILCQ
Sbjct: 178 KNDASSASTTNLSVKVSRPGSSGGPAYDEKITELKLSIDSLEKERDFYFAKLRDIEILCQ 237

Query: 725 TPDIEHLPVVAAIQSI 772
            P+IEHL VV AI+ I
Sbjct: 238 CPEIEHLTVVGAIKRI 253


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