BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023900
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   182   2e-44
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   180   9e-44
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43
ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   177   1e-42
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   164   5e-39

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/108 (80%), Positives = 97/108 (89%)
 Frame = +1

Query: 1   KSVAVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFSSLFPIQVAAWQETIGPA 180
           K+V VLPWMRSP+DVSL EEC L L P LDPRLE AL+ MGFSSLFP+QVA WQET+GP 
Sbjct: 8   KNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVWQETVGPG 67

Query: 181 AFDRDLCINSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLA 324
           AF+RDLCINSPTGSGKTLAYALPIV +LS+R+VKC+RALVVLPTRDLA
Sbjct: 68  AFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLA 115


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  180 bits (457), Expect = 9e-44
 Identities = 86/108 (79%), Positives = 97/108 (89%)
 Frame = +1

Query: 1   KSVAVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFSSLFPIQVAAWQETIGPA 180
           K + VLPWMRSPVDVSLIEEC L++LP LD RL+ AL+ MG SSLFP+Q+A WQE IGP 
Sbjct: 8   KRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQEAIGPG 67

Query: 181 AFDRDLCINSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLA 324
           +FDRDLCINSPTGSGKTLAYALPIVQMLS+R+VKC+RALVVLPTRDLA
Sbjct: 68  SFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLA 115


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/108 (78%), Positives = 96/108 (88%)
 Frame = +1

Query: 1   KSVAVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFSSLFPIQVAAWQETIGPA 180
           K+V VLPWMRSPVDVS  EE  L +LP LDPRL+ AL+ MGF +LFP+Q+A WQETIGP 
Sbjct: 11  KNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIAVWQETIGPG 70

Query: 181 AFDRDLCINSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLA 324
           AF+RDLCINSPTGSGKTLAYALPIVQ+LSTR+VKC+RALVVLPTRDLA
Sbjct: 71  AFERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLA 118


>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/108 (76%), Positives = 95/108 (87%)
 Frame = +1

Query: 1   KSVAVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFSSLFPIQVAAWQETIGPA 180
           K+V VLPWMR PVD+   EECSL L+P LDPRL+ ALE MGF+SLF +QVA WQETIGP 
Sbjct: 9   KNVPVLPWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQVAVWQETIGPG 68

Query: 181 AFDRDLCINSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLA 324
            F+RDLCIN+PTGSGKTLAYALPI+QMLSTRS+KC+RAL+VLPTRDLA
Sbjct: 69  NFERDLCINAPTGSGKTLAYALPIIQMLSTRSIKCLRALIVLPTRDLA 116


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
           lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
           ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  164 bits (416), Expect = 5e-39
 Identities = 74/105 (70%), Positives = 94/105 (89%)
 Frame = +1

Query: 10  AVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFSSLFPIQVAAWQETIGPAAFD 189
           +V+PWMR+PVDVS +E C+L+ LP L+P+L++ALE MG SSLFP+QVA W ETIGP  F+
Sbjct: 13  SVVPWMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAVWHETIGPGGFE 72

Query: 190 RDLCINSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLA 324
           RD+C+NSPTGSGKTL+YALPIVQ+L++R V+C+RALVVLPTRDLA
Sbjct: 73  RDICVNSPTGSGKTLSYALPIVQILASRPVRCLRALVVLPTRDLA 117