BLASTX nr result

ID: Coptis25_contig00023893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023893
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricin...   335   2e-89
ref|XP_002321571.1| predicted protein [Populus trichocarpa] gi|2...   319   7e-85
ref|XP_002318024.1| predicted protein [Populus trichocarpa] gi|2...   317   5e-84
ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Viti...   317   5e-84
ref|XP_004138126.1| PREDICTED: pollen-specific protein SF3-like ...   311   2e-82

>ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricinus communis]
           gi|223550565|gb|EEF52052.1| Pollen-specific protein SF3,
           putative [Ricinus communis]
          Length = 190

 Score =  335 bits (858), Expect = 2e-89
 Identities = 151/188 (80%), Positives = 164/188 (87%)
 Frame = +1

Query: 166 MATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCK 345
           MATFAGTTQKCKACEKTVYLVDQL ADNKVYHK CFRCHHCKGTLKL NYSSF+GVLYCK
Sbjct: 1   MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCK 60

Query: 346 PHFDQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPI 525
           PHFDQL KMTGSLD+SFE  PKT++V RS  Q N N+R+SSMFAGTQDKCV CKKTVYPI
Sbjct: 61  PHFDQLFKMTGSLDKSFEGTPKTVRVDRSADQFNSNSRVSSMFAGTQDKCVACKKTVYPI 120

Query: 526 EKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDKHVN 705
           EKV VD  SYH+ CFRC HGGC+ISPSNY+AHEQ+LYC+HHH QLFK KGNFSQ DKH +
Sbjct: 121 EKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEQRLYCRHHHNQLFKQKGNFSQLDKHEH 180

Query: 706 LNVVPETA 729
           +  V ETA
Sbjct: 181 VKPVTETA 188


>ref|XP_002321571.1| predicted protein [Populus trichocarpa] gi|222868567|gb|EEF05698.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  319 bits (818), Expect = 7e-85
 Identities = 143/189 (75%), Positives = 160/189 (84%)
 Frame = +1

Query: 166 MATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCK 345
           MATFAGTTQKCKAC+KTVYLVDQL  DNK YHK CFRCHHCKGTLKL NYSSF+GVLYC+
Sbjct: 1   MATFAGTTQKCKACDKTVYLVDQLTVDNKFYHKACFRCHHCKGTLKLSNYSSFEGVLYCQ 60

Query: 346 PHFDQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPI 525
           PHFDQL KMTGSLD+SFE  PKT++  RS  Q   N+++SSMFAGTQ+KCV C KTVYP+
Sbjct: 61  PHFDQLFKMTGSLDKSFEGTPKTVRGDRSADQVLSNSKVSSMFAGTQEKCVACNKTVYPL 120

Query: 526 EKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDKHVN 705
           EKV VD  SYH+ CFRCAHGGC+ISPSNY+AHE +LYC+HHH QLFK KGNFSQF KH +
Sbjct: 121 EKVAVDGTSYHKACFRCAHGGCVISPSNYVAHEHRLYCRHHHNQLFKEKGNFSQFGKHEH 180

Query: 706 LNVVPETAT 732
           L  V ETAT
Sbjct: 181 LTPVDETAT 189


>ref|XP_002318024.1| predicted protein [Populus trichocarpa] gi|222858697|gb|EEE96244.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  317 bits (811), Expect = 5e-84
 Identities = 141/188 (75%), Positives = 161/188 (85%)
 Frame = +1

Query: 166 MATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCK 345
           MA FAGTTQKCK+CEKTVY VDQL AD+KVYHK CFRCHHCKGTLKL NYSSF+GVLYCK
Sbjct: 1   MAPFAGTTQKCKSCEKTVYFVDQLTADDKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCK 60

Query: 346 PHFDQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPI 525
           PHFDQLLKMTGSLD+SF+   KT++V RS  Q   N+++SSMFAGTQ+KCV CKKTVYPI
Sbjct: 61  PHFDQLLKMTGSLDKSFKGTSKTVRVDRSADQVQSNSKVSSMFAGTQEKCVACKKTVYPI 120

Query: 526 EKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDKHVN 705
           E+V VD  SYH+ CFRCAHGGC+ISPSN++AHE +LYC+HHH QLFK KGNFSQ DKH +
Sbjct: 121 ERVAVDGTSYHKACFRCAHGGCVISPSNFVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEH 180

Query: 706 LNVVPETA 729
           +  V ETA
Sbjct: 181 VTPVKETA 188


>ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|297733831|emb|CBI15078.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  317 bits (811), Expect = 5e-84
 Identities = 143/177 (80%), Positives = 156/177 (88%)
 Frame = +1

Query: 166 MATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCK 345
           MATFAGTTQKCKACEKTVYLVD+L ADNKVYHK CFRCHHCKGTLKL NYSSF+GVLYCK
Sbjct: 1   MATFAGTTQKCKACEKTVYLVDELTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCK 60

Query: 346 PHFDQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPI 525
           PHFDQL KMTGSLD+SFE APKT+   RS+ QG  N+++SSMFAGTQ+KCV CKKTVYPI
Sbjct: 61  PHFDQLFKMTGSLDKSFEGAPKTV---RSVDQGQTNSKVSSMFAGTQEKCVACKKTVYPI 117

Query: 526 EKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDK 696
           EKV VD  SYH+ CFRC HGGC ISPSNYIAHE +LYC+HHH+QLFK KGNFSQ DK
Sbjct: 118 EKVGVDGTSYHKACFRCTHGGCTISPSNYIAHEHRLYCRHHHSQLFKEKGNFSQLDK 174


>ref|XP_004138126.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
           gi|449477390|ref|XP_004155009.1| PREDICTED:
           pollen-specific protein SF3-like [Cucumis sativus]
          Length = 186

 Score =  311 bits (798), Expect = 2e-82
 Identities = 137/175 (78%), Positives = 154/175 (88%)
 Frame = +1

Query: 175 FAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCKPHF 354
           F GTTQKCKAC+KTVYLVDQL ADNKVYHK CFRCHHCK TLKL NYSSF+GVLYCKPHF
Sbjct: 5   FLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKPHF 64

Query: 355 DQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPIEKV 534
           DQL KMTGSL++SFE+ P+T++  RS  Q   N+++SS+FAGTQDKCVTCKKTVYPIEKV
Sbjct: 65  DQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPIEKV 124

Query: 535 TVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDKH 699
            VD+ SYHR CFRC+HGGC+ISPSNYIAHE +LYC+HHH QLFK KGNFSQ DKH
Sbjct: 125 AVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKH 179


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