BLASTX nr result

ID: Coptis25_contig00023892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00023892
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40841.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinif...   186   2e-45
ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799...   172   2e-41
ref|XP_004172850.1| PREDICTED: uncharacterized LOC101223693, par...   166   1e-39

>emb|CBI40841.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  186 bits (471), Expect = 2e-45
 Identities = 81/112 (72%), Positives = 96/112 (85%)
 Frame = +3

Query: 6   WGDVDQQPCWVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSTHAFEVYKSVQDPFI 185
           WG +DQQPCWVIMLEVLDNLPHDLIYSENQ SPW+EVW+E++H+     E+YK +QDP I
Sbjct: 229 WGSIDQQPCWVIMLEVLDNLPHDLIYSENQASPWMEVWVEKQHNRVALSELYKPLQDPLI 288

Query: 186 SRCIEIIDLDQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLH 341
            RC+EIIDL++DH+  G + +SAAR IWSKVFPKPR+ WLPTGCLKLLEVLH
Sbjct: 289 KRCVEIIDLEKDHNTQGRA-ISAARHIWSKVFPKPRRCWLPTGCLKLLEVLH 339


>ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinifera]
          Length = 450

 Score =  186 bits (471), Expect = 2e-45
 Identities = 81/112 (72%), Positives = 96/112 (85%)
 Frame = +3

Query: 6   WGDVDQQPCWVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSTHAFEVYKSVQDPFI 185
           WG +DQQPCWVIMLEVLDNLPHDLIYSENQ SPW+EVW+E++H+     E+YK +QDP I
Sbjct: 206 WGSIDQQPCWVIMLEVLDNLPHDLIYSENQASPWMEVWVEKQHNRVALSELYKPLQDPLI 265

Query: 186 SRCIEIIDLDQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLH 341
            RC+EIIDL++DH+  G + +SAAR IWSKVFPKPR+ WLPTGCLKLLEVLH
Sbjct: 266 KRCVEIIDLEKDHNTQGRA-ISAARHIWSKVFPKPRRCWLPTGCLKLLEVLH 316


>ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|222845956|gb|EEE83503.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  179 bits (453), Expect = 3e-43
 Identities = 77/113 (68%), Positives = 94/113 (83%)
 Frame = +3

Query: 3   GWGDVDQQPCWVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSTHAFEVYKSVQDPF 182
           GWGD+ QQPCWVIMLEVLDNLPHDL+YSENQV PW EVW+E++HD    FE+YK ++DP 
Sbjct: 192 GWGDIKQQPCWVIMLEVLDNLPHDLVYSENQVFPWKEVWVEKQHDKESLFELYKPLEDPL 251

Query: 183 ISRCIEIIDLDQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLH 341
           I RC+EI++LD++ S      VS A+S+WSKVFPKPR+ WLPTGCLKLL+VLH
Sbjct: 252 IKRCVEIVELDKNQS------VSIAKSVWSKVFPKPRRCWLPTGCLKLLDVLH 298


>ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799456 [Glycine max]
          Length = 441

 Score =  172 bits (437), Expect = 2e-41
 Identities = 76/113 (67%), Positives = 93/113 (82%)
 Frame = +3

Query: 3   GWGDVDQQPCWVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSTHAFEVYKSVQDPF 182
           GWG V+QQPCWVIMLEVLDNLPHDLIY+ENQ+S W+EVW+ER+HD     E+YK +QD  
Sbjct: 196 GWGQVEQQPCWVIMLEVLDNLPHDLIYAENQISSWMEVWVERQHDQETFSELYKPLQDSL 255

Query: 183 ISRCIEIIDLDQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLH 341
           I+RC+EI+DLD+  +   S+  S  +SIWSKV+PKPR+ WLPTGCLKLLEVLH
Sbjct: 256 ITRCVEIMDLDKTKTTQ-STAASTMKSIWSKVYPKPRRCWLPTGCLKLLEVLH 307


>ref|XP_004172850.1| PREDICTED: uncharacterized LOC101223693, partial [Cucumis sativus]
          Length = 249

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/112 (67%), Positives = 93/112 (83%), Gaps = 1/112 (0%)
 Frame = +3

Query: 9   GDVDQQPCWVIMLEVLDNLPHDLIYSENQVSPWLEVWLEREHDSTHAFEVYKSVQDPFIS 188
           GDV++QPCWVIMLEVLDNLPHDLIYSENQVS W+EVW+E++ D     E+YK +QDP I 
Sbjct: 6   GDVEEQPCWVIMLEVLDNLPHDLIYSENQVSSWMEVWVEKQLDRESLVELYKPLQDPLIK 65

Query: 189 RCIEIIDL-DQDHSKMGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLH 341
           RC+EI++  + DH+K  +SV+S A+ IWSK FPKPR+SWLPTGCL LLEVLH
Sbjct: 66  RCVEIMNFKENDHTK--NSVLSKAKGIWSKAFPKPRRSWLPTGCLSLLEVLH 115


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